Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 RPL21P38-201ENST00000418090 167 ntBASIC1.3□□□□□ -2.2
Q9N2K0 SNRPGP10-201ENST00000432323 225 ntBASIC1.3□□□□□ -2.2
Q9N2K0 HMGN2P32-201ENST00000444648 269 ntBASIC1.3□□□□□ -2.2
Q9N2K0 RNU6-437P-201ENST00000459408 95 ntBASIC1.3□□□□□ -2.2
Q9N2K0 AC092991.1-201ENST00000477176 376 ntBASIC1.3□□□□□ -2.2
Q9N2K0 AC098869.1-201ENST00000481627 292 ntBASIC1.3□□□□□ -2.2
Q9N2K0 AC023790.1-201ENST00000482174 347 ntBASIC1.3□□□□□ -2.2
Q9N2K0 RNU6-1007P-201ENST00000516586 107 ntBASIC1.3□□□□□ -2.2
Q9N2K0 MIR4719-201ENST00000585233 84 ntBASIC1.3□□□□□ -2.2
Q9N2K0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.3□□□□□ -2.2
Q9N2K0 JPX_2.1-201ENST00000614161 69 ntBASIC1.3□□□□□ -2.2
Q9N2K0 AC106754.2-201ENST00000623006 233 ntBASIC1.3□□□□□ -2.2
Q9N2K0 Y_RNA.64-201ENST00000362845 102 ntBASIC1.29□□□□□ -2.2
Q9N2K0 RNU6-674P-201ENST00000363831 107 ntBASIC1.29□□□□□ -2.2
Q9N2K0 RNU6-457P-201ENST00000363999 107 ntBASIC1.29□□□□□ -2.2
Q9N2K0 Y_RNA.242-201ENST00000364473 110 ntBASIC1.29□□□□□ -2.2
Q9N2K0 snoU2-30.1-201ENST00000365012 70 ntBASIC1.29□□□□□ -2.2
Q9N2K0 RNU6-806P-201ENST00000365147 105 ntBASIC1.29□□□□□ -2.2
Q9N2K0 RNU6-969P-201ENST00000383900 105 ntBASIC1.29□□□□□ -2.2
Q9N2K0 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
Q9N2K0 AL627390.1-201ENST00000396055 340 ntBASIC1.29□□□□□ -2.2
Q9N2K0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.29□□□□□ -2.2
Q9N2K0 SNORA36B-201ENST00000410438 131 ntBASIC1.29□□□□□ -2.2
Q9N2K0 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
Q9N2K0 RNU7-141P-201ENST00000459304 62 ntBASIC1.29□□□□□ -2.2
Q9N2K0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.29□□□□□ -2.2
Q9N2K0 MIR3664-201ENST00000579074 99 ntBASIC1.29□□□□□ -2.2
Q9N2K0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.29□□□□□ -2.2
Q9N2K0 U6.104-201ENST00000637979 90 ntBASIC1.29□□□□□ -2.2
Q9N2K0 RNU6-1084P-201ENST00000362498 107 ntBASIC1.28□□□□□ -2.2
Q9N2K0 Y_RNA.84-201ENST00000363011 104 ntBASIC1.28□□□□□ -2.2
Q9N2K0 Y_RNA.145-201ENST00000363527 102 ntBASIC1.28□□□□□ -2.2
Q9N2K0 MIR606-201ENST00000384851 96 ntBASIC1.28□□□□□ -2.2
Q9N2K0 MIR215-201ENST00000384858 110 ntBASIC1.28□□□□□ -2.2
Q9N2K0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Q9N2K0 SNORA26.9-201ENST00000391322 122 ntBASIC1.28□□□□□ -2.2
Q9N2K0 CYCSP49-201ENST00000420810 319 ntBASIC1.28□□□□□ -2.2
Q9N2K0 AC114811.1-201ENST00000507207 168 ntBASIC1.28□□□□□ -2.2
Q9N2K0 SNORD45.4-201ENST00000516629 73 ntBASIC1.28□□□□□ -2.2
Q9N2K0 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
Q9N2K0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Q9N2K0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Q9N2K0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Q9N2K0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Q9N2K0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.27□□□□□ -2.21
Q9N2K0 MIR15B-201ENST00000385045 98 ntBASIC1.27□□□□□ -2.21
Q9N2K0 SNORA26.5-201ENST00000391215 123 ntBASIC1.27□□□□□ -2.21
Q9N2K0 MIR1304-201ENST00000408243 91 ntBASIC1.27□□□□□ -2.21
Q9N2K0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.27□□□□□ -2.21
Q9N2K0 MLLT10P1-201ENST00000418346 262 ntBASIC1.27□□□□□ -2.21
Q9N2K0 PIGPP3-201ENST00000425307 415 ntBASIC1.27□□□□□ -2.21
Q9N2K0 AL603825.1-201ENST00000438481 80 ntBASIC1.27□□□□□ -2.21
Q9N2K0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.27□□□□□ -2.21
Q9N2K0 AC093850.1-201ENST00000454121 251 ntBASIC1.27□□□□□ -2.21
Q9N2K0 AC091959.1-201ENST00000495857 238 ntBASIC1.27□□□□□ -2.21
Q9N2K0 SERF1AP1-201ENST00000514575 187 ntBASIC1.27□□□□□ -2.21
Q9N2K0 RNU6-1338P-201ENST00000516328 91 ntBASIC1.27□□□□□ -2.21
Q9N2K0 SNORA25.15-201ENST00000516487 89 ntBASIC1.27□□□□□ -2.21
Q9N2K0 SNORA27.4-201ENST00000516650 95 ntBASIC1.27□□□□□ -2.21
Q9N2K0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.27□□□□□ -2.21
Q9N2K0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.27□□□□□ -2.21
Q9N2K0 AC005357.1-201ENST00000588399 301 ntBASIC1.27□□□□□ -2.21
Q9N2K0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Q9N2K0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Q9N2K0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Q9N2K0 UBE2WP1-201ENST00000362030 340 ntBASIC1.26□□□□□ -2.21
Q9N2K0 Y_RNA.26-201ENST00000362539 101 ntBASIC1.26□□□□□ -2.21
Q9N2K0 RNU1-17P-201ENST00000363022 152 ntBASIC1.26□□□□□ -2.21
Q9N2K0 RNU6-1205P-201ENST00000363625 106 ntBASIC1.26□□□□□ -2.21
Q9N2K0 MTCO2P33-201ENST00000402100 465 ntBASIC1.26□□□□□ -2.21
Q9N2K0 RNU6-955P-201ENST00000410497 104 ntBASIC1.26□□□□□ -2.21
Q9N2K0 RNU6-1203P-201ENST00000410703 110 ntBASIC1.26□□□□□ -2.21
Q9N2K0 MTND5P22-201ENST00000458380 195 ntBASIC1.26□□□□□ -2.21
Q9N2K0 RNU6-917P-201ENST00000516294 104 ntBASIC1.26□□□□□ -2.21
Q9N2K0 RNU6-922P-201ENST00000516753 99 ntBASIC1.26□□□□□ -2.21
Q9N2K0 RN7SKP88-201ENST00000516847 250 ntBASIC1.26□□□□□ -2.21
Q9N2K0 7SK.8-201ENST00000612110 250 ntBASIC1.26□□□□□ -2.21
Q9N2K0 7SK.11-201ENST00000615477 250 ntBASIC1.26□□□□□ -2.21
Q9N2K0 7SK.13-201ENST00000622040 250 ntBASIC1.26□□□□□ -2.21
Q9N2K0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
Q9N2K0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
Q9N2K0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Q9N2K0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.25□□□□□ -2.21
Q9N2K0 Y_RNA.796-201ENST00000364268 102 ntBASIC1.25□□□□□ -2.21
Q9N2K0 SNORA63C-201ENST00000364578 129 ntBASIC1.25□□□□□ -2.21
Q9N2K0 Y_RNA.799-201ENST00000364992 102 ntBASIC1.25□□□□□ -2.21
Q9N2K0 MIR517C-201ENST00000385103 95 ntBASIC1.25□□□□□ -2.21
Q9N2K0 RNU6-763P-201ENST00000390865 106 ntBASIC1.25□□□□□ -2.21
Q9N2K0 RNU2-14P-201ENST00000411053 191 ntBASIC1.25□□□□□ -2.21
Q9N2K0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.25□□□□□ -2.21
Q9N2K0 TRBVB-201ENST00000477100 408 ntBASIC1.25□□□□□ -2.21
Q9N2K0 RNU6-635P-201ENST00000516651 102 ntBASIC1.25□□□□□ -2.21
Q9N2K0 AC013791.1-201ENST00000616619 62 ntBASIC1.25□□□□□ -2.21
Q9N2K0 MIR8065-201ENST00000620577 100 ntBASIC1.25□□□□□ -2.21
Q9N2K0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Q9N2K0 RNU6-1209P-201ENST00000363655 107 ntBASIC1.24□□□□□ -2.21
Q9N2K0 SNORD14E-201ENST00000364009 85 ntBASIC1.24□□□□□ -2.21
Q9N2K0 RNU1-42P-201ENST00000364033 160 ntBASIC1.24□□□□□ -2.21
Q9N2K0 RNU6-1048P-201ENST00000364054 107 ntBASIC1.24□□□□□ -2.21
Q9N2K0 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms