Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 Y_RNA.199-201ENST00000364014 102 ntBASIC1.77□□□□□ -2.13
Q9N2J8 RNU4-41P-201ENST00000364426 143 ntBASIC1.77□□□□□ -2.13
Q9N2J8 Y_RNA.257-201ENST00000364596 102 ntBASIC1.77□□□□□ -2.13
Q9N2J8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Q9N2J8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.77□□□□□ -2.13
Q9N2J8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.77□□□□□ -2.13
Q9N2J8 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
Q9N2J8 Y_RNA.714-201ENST00000517065 90 ntBASIC1.77□□□□□ -2.13
Q9N2J8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.77□□□□□ -2.13
Q9N2J8 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
Q9N2J8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.77□□□□□ -2.13
Q9N2J8 AL591926.4-201ENST00000616895 298 ntBASIC1.77□□□□□ -2.13
Q9N2J8 AC068700.1-201ENST00000565862 3754 ntBASIC1.77□□□□□ -2.13
Q9N2J8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.76□□□□□ -2.13
Q9N2J8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Q9N2J8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Q9N2J8 MIR126-201ENST00000362291 85 ntBASIC1.76□□□□□ -2.13
Q9N2J8 RNU6-661P-201ENST00000362409 107 ntBASIC1.76□□□□□ -2.13
Q9N2J8 RNU6-653P-201ENST00000363074 106 ntBASIC1.76□□□□□ -2.13
Q9N2J8 RNU4-10P-201ENST00000364383 140 ntBASIC1.76□□□□□ -2.13
Q9N2J8 MIR626-201ENST00000385032 94 ntBASIC1.76□□□□□ -2.13
Q9N2J8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Q9N2J8 RNU6-383P-201ENST00000410864 94 ntBASIC1.76□□□□□ -2.13
Q9N2J8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.76□□□□□ -2.13
Q9N2J8 SNRPGP10-201ENST00000432323 225 ntBASIC1.76□□□□□ -2.13
Q9N2J8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Q9N2J8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Q9N2J8 Y_RNA.83-201ENST00000363005 113 ntBASIC1.75□□□□□ -2.13
Q9N2J8 SNORD68-201ENST00000363214 84 ntBASIC1.75□□□□□ -2.13
Q9N2J8 RNU6-1209P-201ENST00000363655 107 ntBASIC1.75□□□□□ -2.13
Q9N2J8 RNU6-414P-201ENST00000363705 104 ntBASIC1.75□□□□□ -2.13
Q9N2J8 Y_RNA.796-201ENST00000364268 102 ntBASIC1.75□□□□□ -2.13
Q9N2J8 Y_RNA.799-201ENST00000364992 102 ntBASIC1.75□□□□□ -2.13
Q9N2J8 RNU4-17P-201ENST00000365598 141 ntBASIC1.75□□□□□ -2.13
Q9N2J8 RNA5SP496-201ENST00000391240 109 ntBASIC1.75□□□□□ -2.13
Q9N2J8 AL445685.2-201ENST00000422551 342 ntBASIC1.75□□□□□ -2.13
Q9N2J8 OR9P1P-201ENST00000496431 281 ntBASIC1.75□□□□□ -2.13
Q9N2J8 RPL23AP91-201ENST00000569211 455 ntBASIC1.75□□□□□ -2.13
Q9N2J8 MIR3935-201ENST00000583472 104 ntBASIC1.75□□□□□ -2.13
Q9N2J8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.75□□□□□ -2.13
Q9N2J8 SNRPGP19-201ENST00000603826 189 ntBASIC1.75□□□□□ -2.13
Q9N2J8 Y_RNA.24-201ENST00000362508 103 ntBASIC1.74□□□□□ -2.13
Q9N2J8 SNORD114-1-201ENST00000362705 72 ntBASIC1.74□□□□□ -2.13
Q9N2J8 U8.5-201ENST00000364528 136 ntBASIC1.74□□□□□ -2.13
Q9N2J8 Y_RNA.308-201ENST00000365043 101 ntBASIC1.74□□□□□ -2.13
Q9N2J8 RNU6-1318P-201ENST00000365389 103 ntBASIC1.74□□□□□ -2.13
Q9N2J8 RNU6-969P-201ENST00000383900 105 ntBASIC1.74□□□□□ -2.13
Q9N2J8 RNU6-131P-201ENST00000391144 107 ntBASIC1.74□□□□□ -2.13
Q9N2J8 RPL30P13-201ENST00000418873 348 ntBASIC1.74□□□□□ -2.13
Q9N2J8 Z98949.2-201ENST00000440996 144 ntBASIC1.74□□□□□ -2.13
Q9N2J8 AC023449.1-201ENST00000454464 154 ntBASIC1.74□□□□□ -2.13
Q9N2J8 RPL23AP42-201ENST00000471152 471 ntBASIC1.74□□□□□ -2.13
Q9N2J8 RNU1-41P-201ENST00000516161 162 ntBASIC1.74□□□□□ -2.13
Q9N2J8 RNU1-48P-201ENST00000516400 162 ntBASIC1.74□□□□□ -2.13
Q9N2J8 AC130289.1-201ENST00000577321 73 ntBASIC1.74□□□□□ -2.13
Q9N2J8 AC021506.2-201ENST00000612354 169 ntBASIC1.74□□□□□ -2.13
Q9N2J8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Q9N2J8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Q9N2J8 MIR411-201ENST00000362239 96 ntBASIC1.73□□□□□ -2.13
Q9N2J8 SNORA12.1-201ENST00000390873 148 ntBASIC1.73□□□□□ -2.13
Q9N2J8 MIR1278-201ENST00000408753 81 ntBASIC1.73□□□□□ -2.13
Q9N2J8 RN7SKP101-201ENST00000411376 320 ntBASIC1.73□□□□□ -2.13
Q9N2J8 MLLT10P1-201ENST00000418346 262 ntBASIC1.73□□□□□ -2.13
Q9N2J8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.73□□□□□ -2.13
Q9N2J8 RNA5SP182-201ENST00000516064 82 ntBASIC1.73□□□□□ -2.13
Q9N2J8 RNU6-1007P-201ENST00000516586 107 ntBASIC1.73□□□□□ -2.13
Q9N2J8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
Q9N2J8 MIR4762-201ENST00000585261 75 ntBASIC1.73□□□□□ -2.13
Q9N2J8 Z83818.1-201ENST00000603584 150 ntBASIC1.73□□□□□ -2.13
Q9N2J8 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
Q9N2J8 AC090425.1-201ENST00000610007 140 ntBASIC1.73□□□□□ -2.13
Q9N2J8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Q9N2J8 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
Q9N2J8 RNU6-200P-201ENST00000364743 107 ntBASIC1.72□□□□□ -2.13
Q9N2J8 RNU6-439P-201ENST00000384188 106 ntBASIC1.72□□□□□ -2.13
Q9N2J8 RNU6-424P-201ENST00000384367 105 ntBASIC1.72□□□□□ -2.13
Q9N2J8 MIR522-201ENST00000385071 87 ntBASIC1.72□□□□□ -2.13
Q9N2J8 SUMO2P12-201ENST00000405924 140 ntBASIC1.72□□□□□ -2.13
Q9N2J8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.72□□□□□ -2.13
Q9N2J8 SNORD11-201ENST00000459124 84 ntBASIC1.72□□□□□ -2.13
Q9N2J8 AC099513.1-201ENST00000490423 301 ntBASIC1.72□□□□□ -2.13
Q9N2J8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.72□□□□□ -2.13
Q9N2J8 AC107393.1-201ENST00000512403 346 ntBASIC1.72□□□□□ -2.13
Q9N2J8 RN7SKP164-201ENST00000516138 266 ntBASIC1.72□□□□□ -2.13
Q9N2J8 RNU6-794P-201ENST00000517261 64 ntBASIC1.72□□□□□ -2.13
Q9N2J8 AC087685.1-201ENST00000587507 141 ntBASIC1.72□□□□□ -2.13
Q9N2J8 AL021707.8-201ENST00000609428 183 ntBASIC1.72□□□□□ -2.13
Q9N2J8 AL513423.1-201ENST00000621695 132 ntBASIC1.72□□□□□ -2.13
Q9N2J8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Q9N2J8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Q9N2J8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
Q9N2J8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Q9N2J8 Y_RNA.229-201ENST00000364347 113 ntBASIC1.71□□□□□ -2.14
Q9N2J8 MIR583-201ENST00000384846 75 ntBASIC1.71□□□□□ -2.14
Q9N2J8 RNU6-381P-201ENST00000391259 108 ntBASIC1.71□□□□□ -2.14
Q9N2J8 MIR1267-201ENST00000408723 78 ntBASIC1.71□□□□□ -2.14
Q9N2J8 RNA5SP489-201ENST00000410986 109 ntBASIC1.71□□□□□ -2.14
Q9N2J8 JTBP1-201ENST00000441314 247 ntBASIC1.71□□□□□ -2.14
Q9N2J8 PGBD4P5-201ENST00000445958 426 ntBASIC1.71□□□□□ -2.14
Q9N2J8 CYCTP-201ENST00000504253 315 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms