Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 MIR522-201ENST00000385071 87 ntBASIC0.73□□□□□ -2.29
ITCHQ96J02 MIR516B2-201ENST00000385190 85 ntBASIC0.73□□□□□ -2.29
ITCHQ96J02 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
ITCHQ96J02 RNY4P36-201ENST00000391116 96 ntBASIC0.73□□□□□ -2.29
ITCHQ96J02 MLLT10P1-201ENST00000418346 262 ntBASIC0.73□□□□□ -2.29
ITCHQ96J02 U8.19-201ENST00000459095 133 ntBASIC0.73□□□□□ -2.29
ITCHQ96J02 RNU6-699P-201ENST00000517081 110 ntBASIC0.73□□□□□ -2.29
ITCHQ96J02 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
ITCHQ96J02 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
ITCHQ96J02 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
ITCHQ96J02 RNU6-1084P-201ENST00000362498 107 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 Y_RNA.142-201ENST00000363491 102 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 AC117470.1-201ENST00000381974 330 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 SNORA72-201ENST00000384339 132 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 MIR136-201ENST00000385207 82 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 RBMX2P4-201ENST00000441256 376 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 RNU6-277P-201ENST00000516272 106 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 RN7SKP295-201ENST00000517264 153 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 MIR3973-201ENST00000579824 107 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 VN1R91P-201ENST00000594377 169 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 AC106800.4-201ENST00000614905 153 ntBASIC0.72□□□□□ -2.29
ITCHQ96J02 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
ITCHQ96J02 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 RNA5SP264-201ENST00000363115 107 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 RNU6-1175P-201ENST00000365200 107 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 Y_RNA.329-201ENST00000365209 107 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 Y_RNA.384-201ENST00000383909 102 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 Y_RNA.570-201ENST00000384750 101 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 MIR15B-201ENST00000385045 98 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
ITCHQ96J02 RNU6-710P-201ENST00000410424 105 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 MCFD2P1-201ENST00000417812 300 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.71□□□□□ -2.3
ITCHQ96J02 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
ITCHQ96J02 SNORD45.4-201ENST00000516629 73 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 SNORA74.3-201ENST00000517108 154 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 Y_RNA.718-201ENST00000517110 102 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 AC090142.3-201ENST00000519012 385 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.71□□□□□ -2.3
ITCHQ96J02 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.71□□□□□ -2.3
ITCHQ96J02 AC006600.1-201ENST00000572529 153 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 RBM11P1-201ENST00000604951 799 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.71□□□□□ -2.3
ITCHQ96J02 MIR1302-1-201ENST00000637932 143 ntBASIC0.71□□□□□ -2.3
ITCHQ96J02 Y_RNA.30-201ENST00000362572 97 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 snoU2-30.1-201ENST00000365012 70 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 SNORD14.1-201ENST00000365609 90 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 Y_RNA.390-201ENST00000383932 102 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 Y_RNA.428-201ENST00000384078 102 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 MIR520C-201ENST00000385005 87 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 RNU6-131P-201ENST00000391144 107 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 RNU6-855P-201ENST00000410395 104 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 AC005534.2-201ENST00000431047 433 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 HMGN2P32-201ENST00000444648 269 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 AC005042.3-201ENST00000453230 174 ntBASIC0.7□□□□□ -2.3
ITCHQ96J02 MIR103A2-201ENST00000362154 78 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 Y_RNA.463-201ENST00000384271 102 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 RPS3AP1-201ENST00000413190 320 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 SNRPGP10-201ENST00000432323 225 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 SNORA18.7-201ENST00000516910 131 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 Y_RNA.714-201ENST00000517065 90 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 SNORD116.3-201ENST00000517176 78 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 UBE2V2P2-201ENST00000587677 504 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 AC122108.2-201ENST00000611946 526 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 MIR4272-201ENST00000635924 64 ntBASIC0.69□□□□□ -2.3
ITCHQ96J02 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ITCHQ96J02 SNORD50B-201ENST00000364995 70 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 Y_RNA.330-201ENST00000365230 109 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 RNU6-1323P-201ENST00000384025 107 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 AL390729.2-201ENST00000416137 156 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.68□□□□□ -2.3
ITCHQ96J02 RNU7-41P-201ENST00000515917 61 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 RNA5SP255-201ENST00000516370 107 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 RNU7-43P-201ENST00000516554 64 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 AP003716.2-201ENST00000528260 108 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 MIR4764-201ENST00000580680 88 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 MIR4423-201ENST00000580922 80 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.68□□□□□ -2.3
ITCHQ96J02 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
ITCHQ96J02 AL132765.2-201ENST00000610812 351 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 AC108706.1-201ENST00000611053 297 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 AC084781.2-201ENST00000615568 161 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 AC010205.1-201ENST00000616668 449 ntBASIC0.68□□□□□ -2.3
ITCHQ96J02 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.68□□□□□ -2.3
ITCHQ96J02 SNORA25.3-201ENST00000363205 127 ntBASIC0.67□□□□□ -2.3
ITCHQ96J02 Y_RNA.331-201ENST00000365267 102 ntBASIC0.67□□□□□ -2.3
ITCHQ96J02 Y_RNA.341-201ENST00000365341 102 ntBASIC0.67□□□□□ -2.3
ITCHQ96J02 FABP5P4-201ENST00000437203 171 ntBASIC0.67□□□□□ -2.3
ITCHQ96J02 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
ITCHQ96J02 RNU7-116P-201ENST00000516940 62 ntBASIC0.67□□□□□ -2.3
ITCHQ96J02 SEPT14P17-201ENST00000617978 177 ntBASIC0.67□□□□□ -2.3
ITCHQ96J02 Y_RNA.187-201ENST00000363918 113 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms