Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SNORD38C-201ENST00000384381 69 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 RNU6-831P-201ENST00000384548 107 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 RNU2-54P-201ENST00000410299 190 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 SNORD12B-201ENST00000410433 91 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 MTND3P21-201ENST00000433774 331 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 SNRPGP14-201ENST00000435400 219 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 MTND2P22-201ENST00000444325 1033 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 snoU13.21-201ENST00000459368 105 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 RNU6-1012P-201ENST00000516606 109 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 MIR2355-201ENST00000517199 87 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 AC018638.8-201ENST00000588755 281 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 AC063944.3-201ENST00000609969 533 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 MIR6718-201ENST00000616153 80 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 Y_RNA.251-201ENST00000364551 99 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 RNA5SP517-201ENST00000364724 117 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 SNORD116-9-201ENST00000384000 95 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 SNORD116-3-201ENST00000384287 95 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 SNORD116-7-201ENST00000384404 95 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 SNORD116-5-201ENST00000384462 95 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 MTCO2P27-201ENST00000420740 428 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 MTND1P1-201ENST00000445453 368 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 HMGN1P10-201ENST00000474557 553 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 AC026782.1-201ENST00000512952 449 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 RNU6-863P-201ENST00000515989 104 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 SNORA25.12-201ENST00000516202 82 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 MIR548AO-201ENST00000579992 96 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 AC006380.1-201ENST00000603598 186 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 RAC1P9-201ENST00000604990 392 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 AC240442.1-201ENST00000616055 283 ntBASIC0.04□□□□□ -2.4
CLHC1Q8NHS4 SNORD14E-201ENST00000364009 85 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 Y_RNA.301-201ENST00000364990 103 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 RNU6-679P-201ENST00000391003 106 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 RNU6-1148P-201ENST00000410992 104 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 SNORD71-201ENST00000411292 86 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 AC074085.1-201ENST00000413598 418 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 RNU7-56P-201ENST00000458744 62 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 RNU6-408P-201ENST00000515910 100 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 AC055872.1-201ENST00000570978 278 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 EIF1P4-201ENST00000572664 335 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 MIR4264-201ENST00000583520 66 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 AC060780.3-201ENST00000589464 80 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 Pinc.1-201ENST00000616452 154 ntBASIC0.03□□□□□ -2.4
CLHC1Q8NHS4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 SNORD118-201ENST00000363593 134 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 SNORA51.10-201ENST00000384418 136 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 U8.17-201ENST00000391292 132 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 SNORD100-201ENST00000408573 76 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 AC015818.7-201ENST00000428754 109 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 AC087499.7-201ENST00000441958 109 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 CHEK2P4-201ENST00000450340 246 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 RNU2-13P-201ENST00000515909 113 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 AC069113.3-201ENST00000521019 150 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 MIR4676-201ENST00000583078 72 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 MTND1P7-201ENST00000632801 297 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
CLHC1Q8NHS4 Y_RNA.101-201ENST00000363154 102 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 RNU6-961P-201ENST00000363893 105 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 RNU6-593P-201ENST00000364716 112 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 RNU2-16P-201ENST00000410712 136 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 AL139396.1-201ENST00000421137 167 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 RNU4-77P-201ENST00000516692 156 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 RNA5SP94-201ENST00000516917 108 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 RNU6-273P-201ENST00000516937 96 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 AC109635.3-201ENST00000529536 185 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 MTND3P12-201ENST00000559068 328 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 MIR4771-2-201ENST00000577758 74 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 MIR4771-1-201ENST00000582617 74 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 AP000753.3-201ENST00000604083 169 ntBASIC0.01□□□□□ -2.41
CLHC1Q8NHS4 Y_RNA.280-201ENST00000364765 112 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 RNU6-1323P-201ENST00000384025 107 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 RNU6-125P-201ENST00000384505 107 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 MIR570-201ENST00000384917 97 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 RNU6-1199P-201ENST00000411249 104 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 AC009161.1-201ENST00000417306 376 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0□□□□□ -2.41
CLHC1Q8NHS4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0□□□□□ -2.41
CLHC1Q8NHS4 MTND5P5-201ENST00000503764 376 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 RNU6-1016P-201ENST00000516689 94 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 AC020891.4-201ENST00000605745 93 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 MIR4791-201ENST00000607666 84 ntBASIC0□□□□□ -2.41
CLHC1Q8NHS4 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 217.2 ms