Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SYNE4Q8N205 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SYNE4Q8N205 SNORD114-7-201ENST00000362520 77 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 RNU6-743P-201ENST00000364151 106 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 SNORD31B-201ENST00000364977 69 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 RNU6-728P-201ENST00000365375 104 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 Y_RNA.353-201ENST00000365440 108 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 BTF3P4-201ENST00000418852 495 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 AC074290.1-201ENST00000448883 135 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 RNU7-107P-201ENST00000459121 61 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 RNU6-437P-201ENST00000459408 95 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.52□□□□□ -2.01
SYNE4Q8N205 AC010598.1-201ENST00000510378 103 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.52□□□□□ -2.01
SYNE4Q8N205 AC005972.2-201ENST00000604690 348 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 AL449363.1-201ENST00000617815 186 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 CENPCP1-201ENST00000533085 2578 ntBASIC2.52□□□□□ -2.01
SYNE4Q8N205 MIR340-201ENST00000362125 95 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 Y_RNA.587-201ENST00000391210 103 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 RNU4-43P-201ENST00000410628 137 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 RN7SKP101-201ENST00000411376 320 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.51□□□□□ -2.01
SYNE4Q8N205 HMGN2P18-201ENST00000450680 270 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 AC104435.1-201ENST00000483483 166 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 Y_RNA.686-201ENST00000516548 134 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 MIR5688-201ENST00000580619 83 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 AL049861.1-201ENST00000603130 150 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 FO624990.1-201ENST00000636373 85 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 MIR6844-201ENST00000637122 62 ntBASIC2.51□□□□□ -2.01
SYNE4Q8N205 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SYNE4Q8N205 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SYNE4Q8N205 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
SYNE4Q8N205 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SYNE4Q8N205 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SYNE4Q8N205 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
SYNE4Q8N205 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SYNE4Q8N205 RNU6-457P-201ENST00000363999 107 ntBASIC2.5□□□□□ -2.01
SYNE4Q8N205 SNORA25.9-201ENST00000365087 128 ntBASIC2.5□□□□□ -2.01
SYNE4Q8N205 Y_RNA.393-201ENST00000383936 102 ntBASIC2.5□□□□□ -2.01
SYNE4Q8N205 RNU6-484P-201ENST00000384016 107 ntBASIC2.5□□□□□ -2.01
SYNE4Q8N205 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.5□□□□□ -2.01
SYNE4Q8N205 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.5□□□□□ -2.01
SYNE4Q8N205 AL159152.1-201ENST00000635019 2587 ntBASIC2.5□□□□□ -2.01
SYNE4Q8N205 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SYNE4Q8N205 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SYNE4Q8N205 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.49□□□□□ -2.01
SYNE4Q8N205 Y_RNA.116-201ENST00000363292 103 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 Y_RNA.521-201ENST00000384560 114 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 RNU6-376P-201ENST00000384731 106 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 MIR518E-201ENST00000385252 88 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 RPS4XP11-201ENST00000446897 772 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 RPL23AP63-201ENST00000498752 471 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 TRMT112P2-201ENST00000512910 132 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 RNU6-659P-201ENST00000516454 104 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 RNU2-56P-201ENST00000516826 190 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.49□□□□□ -2.01
SYNE4Q8N205 ZNF720P1-201ENST00000562403 1939 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SYNE4Q8N205 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
SYNE4Q8N205 RNU6-271P-201ENST00000363858 105 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 RNU4-41P-201ENST00000364426 143 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 RNU6-915P-201ENST00000364943 103 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 RNU6-1235P-201ENST00000384559 107 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 RNU6-1072P-201ENST00000384703 107 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 RNU6-443P-201ENST00000384780 107 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.48□□□□□ -2.01
SYNE4Q8N205 MTCO1P44-201ENST00000441935 243 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 RPS27P1-201ENST00000450552 247 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.48□□□□□ -2.01
SYNE4Q8N205 RNU6-498P-201ENST00000459468 107 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 RPS27P22-201ENST00000478056 241 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 RNA5SP490-201ENST00000517141 136 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 RNU6-667P-201ENST00000517186 102 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.48□□□□□ -2.01
SYNE4Q8N205 AC011603.4-201ENST00000611325 277 ntBASIC2.48□□□□□ -2.01
SYNE4Q8N205 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.48□□□□□ -2.01
SYNE4Q8N205 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SYNE4Q8N205 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SYNE4Q8N205 Y_RNA.91-201ENST00000363042 107 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 RNU6-508P-201ENST00000363231 103 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 RNU1-22P-201ENST00000363334 158 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 RNU6-674P-201ENST00000363831 107 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 RNU6-978P-201ENST00000364371 103 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 Y_RNA.273-201ENST00000364703 102 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 RNA5SP160-201ENST00000364866 120 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 SNORA25B-201ENST00000365507 128 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 RNU6-80P-201ENST00000384195 107 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 MIR561-201ENST00000385216 97 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 AC245102.2-201ENST00000448956 180 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 RNU7-26P-201ENST00000458980 63 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 MIR3646-201ENST00000578301 84 ntBASIC2.47□□□□□ -2.01
SYNE4Q8N205 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.47□□□□□ -2.01
SYNE4Q8N205 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SYNE4Q8N205 SNORA75.5-201ENST00000391291 81 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 RNA5SP270-201ENST00000411361 118 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 AL035461.1-201ENST00000421490 332 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 AL445685.2-201ENST00000422551 342 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 AC097462.1-201ENST00000514125 324 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 RNU6-948P-201ENST00000516374 107 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms