Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RNU2-70P-201ENST00000410718 179 ntBASIC2.34□□□□□ -2.03
PTX3P26022 RNA5SP501-201ENST00000410990 112 ntBASIC2.34□□□□□ -2.03
PTX3P26022 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
PTX3P26022 RNU7-193P-201ENST00000516723 65 ntBASIC2.34□□□□□ -2.03
PTX3P26022 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.03
PTX3P26022 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.34□□□□□ -2.03
PTX3P26022 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.34□□□□□ -2.03
PTX3P26022 MIR378D2-201ENST00000580636 98 ntBASIC2.34□□□□□ -2.03
PTX3P26022 AC008507.4-201ENST00000585464 127 ntBASIC2.34□□□□□ -2.03
PTX3P26022 MIR6817-201ENST00000615588 66 ntBASIC2.34□□□□□ -2.03
PTX3P26022 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
PTX3P26022 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PTX3P26022 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.33□□□□□ -2.04
PTX3P26022 Y_RNA.393-201ENST00000383936 102 ntBASIC2.33□□□□□ -2.04
PTX3P26022 MIR613-201ENST00000385248 95 ntBASIC2.33□□□□□ -2.04
PTX3P26022 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.33□□□□□ -2.04
PTX3P26022 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PTX3P26022 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.33□□□□□ -2.04
PTX3P26022 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.33□□□□□ -2.04
PTX3P26022 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTX3P26022 RNU6-151P-201ENST00000364158 107 ntBASIC2.32□□□□□ -2.04
PTX3P26022 RNU6-597P-201ENST00000365620 102 ntBASIC2.32□□□□□ -2.04
PTX3P26022 RNU6-187P-201ENST00000384139 106 ntBASIC2.32□□□□□ -2.04
PTX3P26022 Y_RNA.521-201ENST00000384560 114 ntBASIC2.32□□□□□ -2.04
PTX3P26022 SNORA12.1-201ENST00000390873 148 ntBASIC2.32□□□□□ -2.04
PTX3P26022 RN7SKP200-201ENST00000410564 320 ntBASIC2.32□□□□□ -2.04
PTX3P26022 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
PTX3P26022 AC079804.2-201ENST00000490376 200 ntBASIC2.32□□□□□ -2.04
PTX3P26022 SNORD116-25-201ENST00000516517 92 ntBASIC2.32□□□□□ -2.04
PTX3P26022 RNA5SP148-201ENST00000516527 94 ntBASIC2.32□□□□□ -2.04
PTX3P26022 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.32□□□□□ -2.04
PTX3P26022 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.32□□□□□ -2.04
PTX3P26022 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PTX3P26022 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PTX3P26022 SNORD68-201ENST00000363214 84 ntBASIC2.31□□□□□ -2.04
PTX3P26022 Y_RNA.215-201ENST00000364204 112 ntBASIC2.31□□□□□ -2.04
PTX3P26022 SNORD114-30-201ENST00000364448 72 ntBASIC2.31□□□□□ -2.04
PTX3P26022 Y_RNA.634-201ENST00000364811 113 ntBASIC2.31□□□□□ -2.04
PTX3P26022 Y_RNA.343-201ENST00000365354 112 ntBASIC2.31□□□□□ -2.04
PTX3P26022 Y_RNA.488-201ENST00000384403 102 ntBASIC2.31□□□□□ -2.04
PTX3P26022 MLLT10P1-201ENST00000418346 262 ntBASIC2.31□□□□□ -2.04
PTX3P26022 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.31□□□□□ -2.04
PTX3P26022 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.31□□□□□ -2.04
PTX3P26022 MRPS17P9-201ENST00000511924 393 ntBASIC2.31□□□□□ -2.04
PTX3P26022 RNU6-365P-201ENST00000517113 106 ntBASIC2.31□□□□□ -2.04
PTX3P26022 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.31□□□□□ -2.04
PTX3P26022 AC067747.1-201ENST00000608026 250 ntBASIC2.31□□□□□ -2.04
PTX3P26022 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.31□□□□□ -2.04
PTX3P26022 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PTX3P26022 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
PTX3P26022 RNU6-112P-201ENST00000363599 104 ntBASIC2.3□□□□□ -2.04
PTX3P26022 TMSB4XP3-201ENST00000445144 114 ntBASIC2.3□□□□□ -2.04
PTX3P26022 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
PTX3P26022 RNU6-346P-201ENST00000516288 111 ntBASIC2.3□□□□□ -2.04
PTX3P26022 RNU6-406P-201ENST00000516470 107 ntBASIC2.3□□□□□ -2.04
PTX3P26022 RNA5SP481-201ENST00000516814 122 ntBASIC2.3□□□□□ -2.04
PTX3P26022 RNU2-19P-201ENST00000517288 84 ntBASIC2.3□□□□□ -2.04
PTX3P26022 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
PTX3P26022 MIR21-201ENST00000362134 72 ntBASIC2.29□□□□□ -2.04
PTX3P26022 RNU6-199P-201ENST00000362954 107 ntBASIC2.29□□□□□ -2.04
PTX3P26022 RNU6-704P-201ENST00000364162 103 ntBASIC2.29□□□□□ -2.04
PTX3P26022 RNU6-978P-201ENST00000364371 103 ntBASIC2.29□□□□□ -2.04
PTX3P26022 SNORA6-201ENST00000384033 151 ntBASIC2.29□□□□□ -2.04
PTX3P26022 Y_RNA.486-201ENST00000384398 107 ntBASIC2.29□□□□□ -2.04
PTX3P26022 RNU6-296P-201ENST00000384608 107 ntBASIC2.29□□□□□ -2.04
PTX3P26022 AL034345.1-201ENST00000407768 123 ntBASIC2.29□□□□□ -2.04
PTX3P26022 RNU2-7P-201ENST00000410794 178 ntBASIC2.29□□□□□ -2.04
PTX3P26022 RPL30P13-201ENST00000418873 348 ntBASIC2.29□□□□□ -2.04
PTX3P26022 STAG3L5P-204ENST00000443759 179 ntBASIC2.29□□□□□ -2.04
PTX3P26022 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
PTX3P26022 AC026436.1-201ENST00000510537 270 ntBASIC2.29□□□□□ -2.04
PTX3P26022 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
PTX3P26022 SNORA31.10-201ENST00000516482 106 ntBASIC2.29□□□□□ -2.04
PTX3P26022 RNU6-504P-201ENST00000516568 104 ntBASIC2.29□□□□□ -2.04
PTX3P26022 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.29□□□□□ -2.04
PTX3P26022 MIR548X2-201ENST00000579776 100 ntBASIC2.29□□□□□ -2.04
PTX3P26022 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.29□□□□□ -2.04
PTX3P26022 MIR6844-201ENST00000637122 62 ntBASIC2.29□□□□□ -2.04
PTX3P26022 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTX3P26022 RNU6-525P-201ENST00000363685 104 ntBASIC2.28□□□□□ -2.04
PTX3P26022 snoU2-30.1-201ENST00000365012 70 ntBASIC2.28□□□□□ -2.04
PTX3P26022 RNU6-768P-201ENST00000384683 107 ntBASIC2.28□□□□□ -2.04
PTX3P26022 MIR802-201ENST00000390235 94 ntBASIC2.28□□□□□ -2.04
PTX3P26022 SNORD37.2-201ENST00000391075 66 ntBASIC2.28□□□□□ -2.04
PTX3P26022 SNORA75.5-201ENST00000391291 81 ntBASIC2.28□□□□□ -2.04
PTX3P26022 RNA5SP24-201ENST00000516478 95 ntBASIC2.28□□□□□ -2.04
PTX3P26022 AP001485.1-201ENST00000604799 199 ntBASIC2.28□□□□□ -2.04
PTX3P26022 MIR6840-201ENST00000611937 71 ntBASIC2.28□□□□□ -2.04
PTX3P26022 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.04
PTX3P26022 RNU6-1084P-201ENST00000362498 107 ntBASIC2.27□□□□□ -2.05
PTX3P26022 Y_RNA.91-201ENST00000363042 107 ntBASIC2.27□□□□□ -2.05
PTX3P26022 SNORD14E-201ENST00000364009 85 ntBASIC2.27□□□□□ -2.05
PTX3P26022 SNORA25.7-201ENST00000364375 127 ntBASIC2.27□□□□□ -2.05
PTX3P26022 RNU4-11P-201ENST00000365287 132 ntBASIC2.27□□□□□ -2.05
PTX3P26022 Y_RNA.336-201ENST00000365307 109 ntBASIC2.27□□□□□ -2.05
PTX3P26022 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PTX3P26022 SNORD72-201ENST00000390994 80 ntBASIC2.27□□□□□ -2.05
PTX3P26022 MIR513C-201ENST00000401352 84 ntBASIC2.27□□□□□ -2.05
PTX3P26022 SNORD23.1-201ENST00000408212 104 ntBASIC2.27□□□□□ -2.05
PTX3P26022 HMGN2P32-201ENST00000444648 269 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms