Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 AL359672.1-201ENST00000442302 409 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.79□□□□□ -2.54
SPTA1P02549 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 SNORD45.4-201ENST00000516629 73 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 RNU6-509P-201ENST00000363519 107 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 RNU6-560P-201ENST00000364007 108 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 RNU6-393P-201ENST00000384475 107 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 SSR1P2-201ENST00000415208 787 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.79□□□□□ -2.54
SPTA1P02549 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.79□□□□□ -2.54
SPTA1P02549 RNU7-67P-201ENST00000459003 62 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.79□□□□□ -2.54
SPTA1P02549 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.79□□□□□ -2.54
SPTA1P02549 MIR4491-201ENST00000581087 68 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 AC138207.3-201ENST00000585289 166 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 AC011458.1-201ENST00000604034 617 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.8□□□□□ -2.54
SPTA1P02549 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
SPTA1P02549 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 GMFBP1-201ENST00000467831 427 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 AC010587.1-201ENST00000505809 469 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 AP000676.1-201ENST00000533307 52 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 MIR4307-201ENST00000582802 84 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 AL356055.1-201ENST00000602528 446 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 MIR6082-201ENST00000613604 109 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 AC097460.3-201ENST00000623099 442 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 AP002371.2-201ENST00000624450 503 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 MIR101-2-201ENST00000362195 79 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 SNORD56.2-201ENST00000363242 71 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 SNORD115-44-201ENST00000365391 82 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 SNORA20B-201ENST00000384220 132 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 RNU4-55P-201ENST00000410731 137 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.8□□□□□ -2.54
SPTA1P02549 AL512286.1-201ENST00000439244 400 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.8□□□□□ -2.54
SPTA1P02549 BNIP3P39-201ENST00000601077 554 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 AC005776.1-201ENST00000603164 290 ntBASIC-0.8□□□□□ -2.54
SPTA1P02549 RNU6-502P-201ENST00000362419 108 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 RNU4-66P-201ENST00000365199 138 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 RNU6-117P-201ENST00000365415 107 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 MT-TF-201ENST00000387314 71 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 AL008987.1-201ENST00000415528 237 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 MTCO2P11-201ENST00000431069 680 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 snoU13.6-201ENST00000458785 104 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 AC022137.1-201ENST00000483735 151 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 U7.6-201ENST00000610841 64 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 AC008873.1-201ENST00000625051 138 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 SNORD38B-201ENST00000384690 67 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 SNORA26.5-201ENST00000391215 123 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 SNORA75.4-201ENST00000391278 119 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.81□□□□□ -2.54
SPTA1P02549 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.81□□□□□ -2.54
SPTA1P02549 HMGN2P32-201ENST00000444648 269 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.81□□□□□ -2.54
SPTA1P02549 MTCO3P38-201ENST00000468910 766 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.81□□□□□ -2.54
SPTA1P02549 AC245297.2-201ENST00000610119 565 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 AC091931.1-201ENST00000623488 728 ntBASIC-0.81□□□□□ -2.54
SPTA1P02549 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.82□□□□□ -2.54
SPTA1P02549 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.82□□□□□ -2.54
SPTA1P02549 MIR204-201ENST00000385200 110 ntBASIC-0.82□□□□□ -2.54
SPTA1P02549 SNORA40.2-201ENST00000390847 128 ntBASIC-0.82□□□□□ -2.54
SPTA1P02549 AC091133.4-201ENST00000511142 308 ntBASIC-0.82□□□□□ -2.54
SPTA1P02549 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.82□□□□□ -2.54
SPTA1P02549 AC140658.3-201ENST00000567603 271 ntBASIC-0.82□□□□□ -2.54
SPTA1P02549 DISC2.1-201ENST00000612827 205 ntBASIC-0.82□□□□□ -2.54
SPTA1P02549 MIR148A-201ENST00000362215 68 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 SNORA63.5-201ENST00000363548 123 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 RNU6-609P-201ENST00000365459 107 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 SNORA22B-201ENST00000383876 138 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 SNORA24.1-201ENST00000384401 135 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 MIR181B2-201ENST00000385004 89 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 MTCO3P40-201ENST00000392516 676 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 MTND4P3-201ENST00000417829 541 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 RPS27AP14-201ENST00000422868 454 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 MTND3P9-201ENST00000429526 346 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 SNRPGP10-201ENST00000432323 225 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 RNU7-104P-201ENST00000459398 79 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 RNU6-765P-201ENST00000516916 99 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 RNU6-430P-201ENST00000517078 107 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 AC005828.6-201ENST00000606610 232 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 MTND1P7-201ENST00000632801 297 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 MIR382-201ENST00000637119 76 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 Z97988.1-201ENST00000637697 135 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms