Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MIR4778-201ENST00000577635 80 ntBASIC1.41□□□□□ -2.18
TO15178 MIR4769-201ENST00000584126 77 ntBASIC1.41□□□□□ -2.18
TO15178 AL078604.3-201ENST00000615580 211 ntBASIC1.41□□□□□ -2.18
TO15178 AL353997.5-201ENST00000618886 171 ntBASIC1.41□□□□□ -2.18
TO15178 AC027279.3-201ENST00000625055 122 ntBASIC1.41□□□□□ -2.18
TO15178 U6.104-201ENST00000637979 90 ntBASIC1.41□□□□□ -2.18
TO15178 AP000648.3-201ENST00000623539 4507 ntBASIC1.4□□□□□ -2.18
TO15178 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
TO15178 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TO15178 RNU6-199P-201ENST00000362954 107 ntBASIC1.4□□□□□ -2.19
TO15178 RNU6-238P-201ENST00000363313 106 ntBASIC1.4□□□□□ -2.19
TO15178 RNU6-899P-201ENST00000363947 107 ntBASIC1.4□□□□□ -2.19
TO15178 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
TO15178 RNU6-163P-201ENST00000384396 106 ntBASIC1.4□□□□□ -2.19
TO15178 SNORA26.5-201ENST00000391215 123 ntBASIC1.4□□□□□ -2.19
TO15178 CYCTP-201ENST00000504253 315 ntBASIC1.4□□□□□ -2.19
TO15178 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
TO15178 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
TO15178 MIR4762-201ENST00000585261 75 ntBASIC1.4□□□□□ -2.19
TO15178 AC120024.3-201ENST00000603167 156 ntBASIC1.4□□□□□ -2.19
TO15178 AL365434.2-201ENST00000607979 234 ntBASIC1.4□□□□□ -2.19
TO15178 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.4□□□□□ -2.19
TO15178 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TO15178 RNU6-833P-201ENST00000363486 107 ntBASIC1.39□□□□□ -2.19
TO15178 Y_RNA.176-201ENST00000363815 109 ntBASIC1.39□□□□□ -2.19
TO15178 RNU6-1048P-201ENST00000364054 107 ntBASIC1.39□□□□□ -2.19
TO15178 Y_RNA.203-201ENST00000364106 102 ntBASIC1.39□□□□□ -2.19
TO15178 Y_RNA.459-201ENST00000384251 102 ntBASIC1.39□□□□□ -2.19
TO15178 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
TO15178 MIR891A-201ENST00000401237 79 ntBASIC1.39□□□□□ -2.19
TO15178 SNORA36B-201ENST00000410438 131 ntBASIC1.39□□□□□ -2.19
TO15178 RNU2-14P-201ENST00000411053 191 ntBASIC1.39□□□□□ -2.19
TO15178 MLLT10P1-201ENST00000418346 262 ntBASIC1.39□□□□□ -2.19
TO15178 TRBVB-201ENST00000477100 408 ntBASIC1.39□□□□□ -2.19
TO15178 AC091959.1-201ENST00000495857 238 ntBASIC1.39□□□□□ -2.19
TO15178 SERF1AP1-201ENST00000514575 187 ntBASIC1.39□□□□□ -2.19
TO15178 RNU6-1338P-201ENST00000516328 91 ntBASIC1.39□□□□□ -2.19
TO15178 SNORA27.4-201ENST00000516650 95 ntBASIC1.39□□□□□ -2.19
TO15178 RNU6-570P-201ENST00000517051 105 ntBASIC1.39□□□□□ -2.19
TO15178 AL117187.1-201ENST00000555482 181 ntBASIC1.39□□□□□ -2.19
TO15178 AC008269.2-201ENST00000561915 1105 ntBASIC1.39□□□□□ -2.19
TO15178 MIR2681-201ENST00000581814 105 ntBASIC1.39□□□□□ -2.19
TO15178 AC136443.5-201ENST00000603741 370 ntBASIC1.39□□□□□ -2.19
TO15178 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.39□□□□□ -2.19
TO15178 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TO15178 Y_RNA.16-201ENST00000362421 102 ntBASIC1.38□□□□□ -2.19
TO15178 SNORD26-201ENST00000384147 75 ntBASIC1.38□□□□□ -2.19
TO15178 Y_RNA.574-201ENST00000384766 95 ntBASIC1.38□□□□□ -2.19
TO15178 MIR522-201ENST00000385071 87 ntBASIC1.38□□□□□ -2.19
TO15178 RNU6-131P-201ENST00000391144 107 ntBASIC1.38□□□□□ -2.19
TO15178 MTCO2P33-201ENST00000402100 465 ntBASIC1.38□□□□□ -2.19
TO15178 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
TO15178 MIR548F4-201ENST00000408515 105 ntBASIC1.38□□□□□ -2.19
TO15178 SNRPGP10-201ENST00000432323 225 ntBASIC1.38□□□□□ -2.19
TO15178 RNU6-437P-201ENST00000459408 95 ntBASIC1.38□□□□□ -2.19
TO15178 RPL39P38-201ENST00000467018 153 ntBASIC1.38□□□□□ -2.19
TO15178 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
TO15178 AL360085.1-201ENST00000604713 532 ntBASIC1.38□□□□□ -2.19
TO15178 JPX_2.1-201ENST00000614161 69 ntBASIC1.38□□□□□ -2.19
TO15178 AC007742.2-201ENST00000618226 398 ntBASIC1.38□□□□□ -2.19
TO15178 AC106754.2-201ENST00000623006 233 ntBASIC1.38□□□□□ -2.19
TO15178 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TO15178 RNU6-1084P-201ENST00000362498 107 ntBASIC1.37□□□□□ -2.19
TO15178 Y_RNA.162-201ENST00000363683 102 ntBASIC1.37□□□□□ -2.19
TO15178 RNU6-674P-201ENST00000363831 107 ntBASIC1.37□□□□□ -2.19
TO15178 RNU6-457P-201ENST00000363999 107 ntBASIC1.37□□□□□ -2.19
TO15178 SNORA2.2-201ENST00000365473 135 ntBASIC1.37□□□□□ -2.19
TO15178 Y_RNA.376-201ENST00000365638 108 ntBASIC1.37□□□□□ -2.19
TO15178 RNU6-144P-201ENST00000383951 107 ntBASIC1.37□□□□□ -2.19
TO15178 RNU6-763P-201ENST00000390865 106 ntBASIC1.37□□□□□ -2.19
TO15178 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
TO15178 MIR1302-6-201ENST00000408466 90 ntBASIC1.37□□□□□ -2.19
TO15178 AC093850.1-201ENST00000454121 251 ntBASIC1.37□□□□□ -2.19
TO15178 RNU6-327P-201ENST00000516270 127 ntBASIC1.37□□□□□ -2.19
TO15178 SCARNA24.2-201ENST00000516968 130 ntBASIC1.37□□□□□ -2.19
TO15178 RNU6-1116P-201ENST00000517269 99 ntBASIC1.37□□□□□ -2.19
TO15178 DEFB108E-201ENST00000524692 240 ntBASIC1.37□□□□□ -2.19
TO15178 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.37□□□□□ -2.19
TO15178 AL513534.2-201ENST00000603836 250 ntBASIC1.37□□□□□ -2.19
TO15178 MIR8062-201ENST00000621515 85 ntBASIC1.37□□□□□ -2.19
TO15178 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.37□□□□□ -2.19
TO15178 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
TO15178 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TO15178 RNA5SP99-201ENST00000364020 114 ntBASIC1.36□□□□□ -2.19
TO15178 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
TO15178 Y_RNA.512-201ENST00000384518 102 ntBASIC1.36□□□□□ -2.19
TO15178 MIR320A-201ENST00000385302 82 ntBASIC1.36□□□□□ -2.19
TO15178 SNORA17.3-201ENST00000391159 129 ntBASIC1.36□□□□□ -2.19
TO15178 PIGPP3-201ENST00000425307 415 ntBASIC1.36□□□□□ -2.19
TO15178 RPS27P16-201ENST00000425758 201 ntBASIC1.36□□□□□ -2.19
TO15178 Y_RNA.637-201ENST00000459424 114 ntBASIC1.36□□□□□ -2.19
TO15178 AC092991.1-201ENST00000477176 376 ntBASIC1.36□□□□□ -2.19
TO15178 AC114811.1-201ENST00000507207 168 ntBASIC1.36□□□□□ -2.19
TO15178 RNU6-322P-201ENST00000516010 103 ntBASIC1.36□□□□□ -2.19
TO15178 SCARNA15.1-201ENST00000516384 125 ntBASIC1.36□□□□□ -2.19
TO15178 MIR4303-201ENST00000581299 66 ntBASIC1.36□□□□□ -2.19
TO15178 AL645939.4-201ENST00000604495 135 ntBASIC1.36□□□□□ -2.19
TO15178 AC013791.1-201ENST00000616619 62 ntBASIC1.36□□□□□ -2.19
TO15178 AC134026.1-201ENST00000623249 2239 ntBASIC1.36□□□□□ -2.19
TO15178 AL391987.6-201ENST00000305671 199 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 267.8 ms