Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MIR204-201ENST00000385200 110 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 MIR153-2-201ENST00000385225 87 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 AL500527.2-201ENST00000454105 95 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 U8.19-201ENST00000459095 133 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 U8.22-201ENST00000459141 133 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 GMFBP1-201ENST00000467831 427 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 RPL30P10-201ENST00000488148 337 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-410P-201ENST00000517006 107 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 UBL5P4-201ENST00000562584 236 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 AC090616.2-202ENST00000584248 222 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 AC072046.2-201ENST00000618366 268 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 AC009248.2-201ENST00000619826 254 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-268P-201ENST00000364174 107 ntBASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-442P-201ENST00000383968 104 ntBASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-74P-201ENST00000384235 107 ntBASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 BX276092.1-201ENST00000427368 251 ntBASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 MTND3P1-201ENST00000441336 220 ntBASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 MTATP6P14-201ENST00000455189 673 ntBASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 MTND5P34-201ENST00000568888 325 ntBASIC-1.4□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-403P-201ENST00000363163 104 ntBASIC-1.41□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-455P-201ENST00000384681 107 ntBASIC-1.41□□□□□ -2.64
CHKB-CPT1BH3BT56 SNORD110-201ENST00000408189 75 ntBASIC-1.41□□□□□ -2.64
CHKB-CPT1BH3BT56 Z82188.1-201ENST00000436709 154 ntBASIC-1.41□□□□□ -2.64
CHKB-CPT1BH3BT56 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.41□□□□□ -2.64
CHKB-CPT1BH3BT56 AC131281.1-201ENST00000522984 164 ntBASIC-1.41□□□□□ -2.64
CHKB-CPT1BH3BT56 AL133255.1-201ENST00000606374 441 ntBASIC-1.41□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-602P-201ENST00000411155 105 ntBASIC-1.42□□□□□ -2.64
CHKB-CPT1BH3BT56 MTATP6P18-201ENST00000417994 673 ntBASIC-1.42□□□□□ -2.64
CHKB-CPT1BH3BT56 AC006210.1-201ENST00000424882 111 ntBASIC-1.42□□□□□ -2.64
CHKB-CPT1BH3BT56 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.42□□□□□ -2.64
CHKB-CPT1BH3BT56 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.42□□□□□ -2.64
CHKB-CPT1BH3BT56 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.42□□□□□ -2.64
CHKB-CPT1BH3BT56 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.42□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR4499-201ENST00000584834 69 ntBASIC-1.42□□□□□ -2.64
CHKB-CPT1BH3BT56 AC005771.1-201ENST00000585581 349 ntBASIC-1.42□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.43□□□□□ -2.64
CHKB-CPT1BH3BT56 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.43□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-606P-201ENST00000384721 111 ntBASIC-1.43□□□□□ -2.64
CHKB-CPT1BH3BT56 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.43□□□□□ -2.64
CHKB-CPT1BH3BT56 MTND1P24-201ENST00000552175 861 ntBASIC-1.43□□□□□ -2.64
CHKB-CPT1BH3BT56 CPDP1-201ENST00000579660 283 ntBASIC-1.43□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR4324-201ENST00000584846 72 ntBASIC-1.43□□□□□ -2.64
CHKB-CPT1BH3BT56 U2.17-201ENST00000611454 95 ntBASIC-1.43□□□□□ -2.64
CHKB-CPT1BH3BT56 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.44□□□□□ -2.64
CHKB-CPT1BH3BT56 SNORD12C-201ENST00000386307 89 ntBASIC-1.44□□□□□ -2.64
CHKB-CPT1BH3BT56 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.44□□□□□ -2.64
CHKB-CPT1BH3BT56 SNORA13-201ENST00000458790 133 ntBASIC-1.44□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR6738-201ENST00000619620 64 ntBASIC-1.44□□□□□ -2.64
CHKB-CPT1BH3BT56 SNORD114-25-201ENST00000363742 72 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-541P-201ENST00000384709 110 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR521-1-201ENST00000384902 87 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-913P-201ENST00000390913 95 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 SNORD41.1-201ENST00000391000 69 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 RNA5SP118-201ENST00000410385 109 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 AL031667.1-201ENST00000440222 725 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-437P-201ENST00000459408 95 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 AC010655.3-201ENST00000478818 450 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR548AX-201ENST00000580117 73 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 uc_338.19-201ENST00000616808 99 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 AC099654.13-201ENST00000639774 207 ntBASIC-1.45□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR410-201ENST00000362222 80 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 SNORD50.1-201ENST00000362987 71 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-931P-201ENST00000363850 107 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 RNA5SP245-201ENST00000364239 121 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR9-2-201ENST00000384838 87 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 MTATP6P17-201ENST00000431030 672 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 AC104850.1-201ENST00000435940 476 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-274P-201ENST00000459566 107 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 RNA5SP470-201ENST00000516463 106 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR378F-201ENST00000578143 78 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 AL360085.1-201ENST00000604713 532 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 AC009878.1-201ENST00000621819 340 ntBASIC-1.46□□□□□ -2.64
CHKB-CPT1BH3BT56 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-24P-201ENST00000384440 107 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 AL590002.1-201ENST00000406554 418 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-325P-201ENST00000411132 105 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU7-67P-201ENST00000459003 62 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 AC104576.1-201ENST00000524225 88 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 AC024405.2-202ENST00000532731 184 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR4491-201ENST00000581087 68 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 MIR3124-201ENST00000582636 67 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 AC005972.2-201ENST00000604690 348 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 AL158063.1-201ENST00000615349 536 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 AL049777.1-201ENST00000622740 518 ntBASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.47□□□□□ -2.64
CHKB-CPT1BH3BT56 RNU6-502P-201ENST00000362419 108 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 330.1 ms