Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL034345.1-201ENST00000407768 123 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR1252-201ENST00000408861 65 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 MTCO2P12-201ENST00000427426 682 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 HSPE1P25-201ENST00000455484 251 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC079140.2-201ENST00000506193 142 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-897P-201ENST00000517135 105 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-165P-201ENST00000517170 99 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-1116P-201ENST00000517269 99 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC022616.4-201ENST00000522985 181 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 AP002004.2-201ENST00000531656 154 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 RPL21P9-201ENST00000556149 474 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR3145-201ENST00000580727 82 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR4300-201ENST00000581016 96 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL162424.1-201ENST00000602325 221 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC006380.1-201ENST00000603598 186 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL442644.1-201ENST00000454390 3105 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.214-201ENST00000364201 112 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.331-201ENST00000365267 102 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.418-201ENST00000384029 102 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.540-201ENST00000384638 111 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 ELOCP20-201ENST00000422460 345 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC092991.1-201ENST00000477176 376 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORA70.12-201ENST00000516084 153 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-496P-201ENST00000516145 99 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC019176.1-201ENST00000518519 225 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR4680-201ENST00000580906 66 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC124312.5-201ENST00000604451 268 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL078604.3-201ENST00000615580 211 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.153-201ENST00000363615 91 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.158-201ENST00000363651 101 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.183-201ENST00000363882 113 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-324P-201ENST00000363957 106 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-801P-201ENST00000364087 105 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-806P-201ENST00000365147 105 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORA63.7-201ENST00000365579 123 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-342P-201ENST00000384521 104 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.526-201ENST00000384572 110 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORD41-201ENST00000386967 70 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNA5SP482-201ENST00000391269 118 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-101P-201ENST00000410323 104 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL390729.2-201ENST00000416137 156 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC093850.1-201ENST00000454121 251 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RPL39P38-201ENST00000467018 153 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RPL30P7-201ENST00000479312 323 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC098869.1-201ENST00000481627 292 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-397P-201ENST00000516226 104 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-917P-201ENST00000516294 104 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU7-28P-201ENST00000516759 62 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL512310.8-201ENST00000550183 120 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR4778-201ENST00000577635 80 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR3664-201ENST00000579074 99 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC113195.1-201ENST00000579952 141 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR4762-201ENST00000585261 75 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC011373.1-201ENST00000607270 237 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC040896.1-201ENST00000613819 479 ntBASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.94□□□□□ -2.26
TMX2-CTNND1H3BSU7 snoU2_19.2-201ENST00000363024 80 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU4-76P-201ENST00000364509 141 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 U8.5-201ENST00000364528 136 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-1227P-201ENST00000383981 107 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-1323P-201ENST00000384025 107 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR562-201ENST00000384894 95 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU2-14P-201ENST00000411053 191 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC233266.1-201ENST00000454518 96 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNA5SP480-201ENST00000516840 109 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU7-110P-201ENST00000516891 62 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-988P-201ENST00000519081 107 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC005972.2-201ENST00000604690 348 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORA28-201ENST00000606769 126 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC242852.1-201ENST00000612151 96 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL591926.4-201ENST00000616895 298 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL121890.5-201ENST00000620848 304 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 AC244015.1-201ENST00000622301 99 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORD3E-202ENST00000627253 216 ntBASIC0.93□□□□□ -2.26
TMX2-CTNND1H3BSU7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL391516.1-201ENST00000554380 2449 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORD113-8-201ENST00000363497 74 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 SNORD114-26-201ENST00000363543 72 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.265-201ENST00000364677 108 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 U8.7-201ENST00000364940 136 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNA5SP259-201ENST00000365541 109 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.383-201ENST00000383855 97 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.424-201ENST00000384063 103 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.527-201ENST00000384573 102 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR215-201ENST00000384858 110 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR526A1-201ENST00000384897 85 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR522-201ENST00000385071 87 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU11-5P-201ENST00000391216 129 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 LINC01399-202ENST00000458450 244 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-191P-201ENST00000516295 94 ntBASIC0.92□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU2-56P-201ENST00000516826 190 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms