Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC53A6NM62 MTND4LP30-201ENST00000454092 297 ntBASIC1.55□□□□□ -2.16
LRRC53A6NM62 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
LRRC53A6NM62 Y_RNA.637-201ENST00000459424 114 ntBASIC1.55□□□□□ -2.16
LRRC53A6NM62 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC53A6NM62 Y_RNA.47-201ENST00000362697 108 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 RNU6-1309P-201ENST00000363305 108 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 Y_RNA.176-201ENST00000363815 109 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 RNU6-457P-201ENST00000363999 107 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 Y_RNA.483-201ENST00000384380 101 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 MIR522-201ENST00000385071 87 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 RPL30P13-201ENST00000418873 348 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 PIGPP3-201ENST00000425307 415 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 HMGN1P7-201ENST00000491722 313 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 SNORA27.4-201ENST00000516650 95 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 MIR3937-201ENST00000580135 106 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 AC005357.1-201ENST00000588399 301 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 AL078604.3-201ENST00000615580 211 ntBASIC1.54□□□□□ -2.16
LRRC53A6NM62 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.54□□□□□ -2.16
LRRC53A6NM62 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
LRRC53A6NM62 Y_RNA.203-201ENST00000364106 102 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 Y_RNA.237-201ENST00000364439 102 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 U8.5-201ENST00000364528 136 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 RNU6-60P-201ENST00000364792 103 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 RNU6-163P-201ENST00000384396 106 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 MIR1278-201ENST00000408753 81 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 RN7SKP51-201ENST00000410781 304 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 RPS27P16-201ENST00000425758 201 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.53□□□□□ -2.16
LRRC53A6NM62 AC092991.1-201ENST00000477176 376 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.53□□□□□ -2.16
LRRC53A6NM62 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LRRC53A6NM62 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 MIR4762-201ENST00000585261 75 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 AC120024.3-201ENST00000603167 156 ntBASIC1.53□□□□□ -2.16
LRRC53A6NM62 AC068700.1-201ENST00000565862 3754 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 AL391987.6-201ENST00000305671 199 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 RNU6-1272P-201ENST00000362776 107 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 RNU6-199P-201ENST00000362954 107 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 RNU6-899P-201ENST00000363947 107 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 Y_RNA.217-201ENST00000364214 105 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 Y_RNA.461-201ENST00000384263 103 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 RNU6-472P-201ENST00000384299 107 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 MIR1302-6-201ENST00000408466 90 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 SNRPGP10-201ENST00000432323 225 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 RNU6-437P-201ENST00000459408 95 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 Y_RNA.641-201ENST00000459414 105 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 AC114811.1-201ENST00000507207 168 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 AL161670.1-201ENST00000554348 137 ntBASIC1.52□□□□□ -2.17
LRRC53A6NM62 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
LRRC53A6NM62 SNORD33-201ENST00000362761 85 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 Y_RNA.133-201ENST00000363428 110 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 Y_RNA.396-201ENST00000383949 103 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 MIR891A-201ENST00000401237 79 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.51□□□□□ -2.17
LRRC53A6NM62 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.51□□□□□ -2.17
LRRC53A6NM62 BTF3P11-201ENST00000426582 477 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.51□□□□□ -2.17
LRRC53A6NM62 CYCTP-201ENST00000504253 315 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 RNU6-1045P-201ENST00000516321 107 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.51□□□□□ -2.17
LRRC53A6NM62 AC013791.1-201ENST00000616619 62 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 snoU18.1-201ENST00000629629 71 ntBASIC1.51□□□□□ -2.17
LRRC53A6NM62 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
LRRC53A6NM62 RNU6-833P-201ENST00000363486 107 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 Y_RNA.149-201ENST00000363558 117 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 RNU6-1209P-201ENST00000363655 107 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 Y_RNA.796-201ENST00000364268 102 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 Y_RNA.799-201ENST00000364992 102 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.5□□□□□ -2.17
LRRC53A6NM62 SNX2P2-201ENST00000424553 323 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 SNRPGP13-201ENST00000442212 177 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 AL118496.2-201ENST00000448300 230 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 RNU6-917P-201ENST00000516294 104 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 AL008718.3-201ENST00000610217 321 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 AC027279.3-201ENST00000625055 122 ntBASIC1.5□□□□□ -2.17
LRRC53A6NM62 UBE2WP1-201ENST00000362030 340 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 RNU6-1084P-201ENST00000362498 107 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 RNU6-1205P-201ENST00000363625 106 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 RNU6-674P-201ENST00000363831 107 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 SNORD50B-201ENST00000364995 70 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 MIR568-201ENST00000385036 95 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 RNU6-131P-201ENST00000391144 107 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 MTCO2P24-201ENST00000515611 426 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 MIR5692C2-201ENST00000577959 77 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 AP001485.1-201ENST00000604799 199 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.49□□□□□ -2.17
LRRC53A6NM62 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms