Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNU4-83P-201ENST00000410863 133 ntBASIC-1.6□□□□□ -2.67
RGPD3A6NKT7 AC016907.1-201ENST00000419483 435 ntBASIC-1.6□□□□□ -2.67
RGPD3A6NKT7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.6□□□□□ -2.67
RGPD3A6NKT7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
RGPD3A6NKT7 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.6□□□□□ -2.67
RGPD3A6NKT7 RNU7-161P-201ENST00000517289 62 ntBASIC-1.6□□□□□ -2.67
RGPD3A6NKT7 BNIP3P40-201ENST00000596017 556 ntBASIC-1.6□□□□□ -2.67
RGPD3A6NKT7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 SNORD41.1-201ENST00000391000 69 ntBASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 RNU6-958P-201ENST00000516995 106 ntBASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 AC131281.1-201ENST00000522984 164 ntBASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 AF250324.2-201ENST00000608299 610 ntBASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 MIR6854-201ENST00000614935 69 ntBASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.61□□□□□ -2.67
RGPD3A6NKT7 MIR522-201ENST00000385071 87 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 RNU6-131P-201ENST00000391144 107 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 CALM2P2-201ENST00000428512 440 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 AC244505.6-201ENST00000452829 130 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 RNU7-51P-201ENST00000516560 62 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 AC092574.1-201ENST00000609771 420 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 RNU6-502P-201ENST00000362419 108 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 AL354751.2-201ENST00000415471 210 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 AC108059.2-201ENST00000434626 151 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 AP000676.1-201ENST00000533307 52 ntBASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.62□□□□□ -2.67
RGPD3A6NKT7 MIR20A-201ENST00000362279 71 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 RNA5SP245-201ENST00000364239 121 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 RNU6-609P-201ENST00000365459 107 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 RNU6-442P-201ENST00000383968 104 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 AL590002.1-201ENST00000406554 418 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 RNA5SP494-201ENST00000410653 129 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 AC137499.1-201ENST00000427602 88 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 MTND4LP7-201ENST00000431728 294 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 AC236972.2-201ENST00000434979 310 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 AL445193.1-201ENST00000441183 141 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 RNU6-765P-201ENST00000516916 99 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 AC139792.3-201ENST00000623525 224 ntBASIC-1.63□□□□□ -2.67
RGPD3A6NKT7 MIR30D-201ENST00000362283 70 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 snoU13.6-201ENST00000458785 104 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 AC072039.2-201ENST00000608883 439 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 AL391834.2-201ENST00000609982 546 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 AL512506.1-201ENST00000613918 449 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 AC009159.2-201ENST00000617603 606 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 MIR16-2-201ENST00000362117 81 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 SNORD18.2-201ENST00000459604 70 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 AC105417.1-201ENST00000514691 285 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 AC073539.2-201ENST00000597113 165 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 RNU6-88P-201ENST00000606801 100 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 AC011603.4-201ENST00000611325 277 ntBASIC-1.64□□□□□ -2.67
RGPD3A6NKT7 RNY4P36-201ENST00000391116 96 ntBASIC-1.65□□□□□ -2.67
RGPD3A6NKT7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.65□□□□□ -2.67
RGPD3A6NKT7 MTCO2P11-201ENST00000431069 680 ntBASIC-1.65□□□□□ -2.67
RGPD3A6NKT7 AL512286.1-201ENST00000439244 400 ntBASIC-1.65□□□□□ -2.67
RGPD3A6NKT7 RPL30P15-201ENST00000457129 321 ntBASIC-1.65□□□□□ -2.67
RGPD3A6NKT7 MTND1P35-201ENST00000526739 508 ntBASIC-1.65□□□□□ -2.67
RGPD3A6NKT7 HIF1AP1-201ENST00000553642 175 ntBASIC-1.65□□□□□ -2.67
RGPD3A6NKT7 AC005776.1-201ENST00000603164 290 ntBASIC-1.65□□□□□ -2.67
RGPD3A6NKT7 AL596211.1-201ENST00000569873 2277 ntBASIC-1.65□□□□□ -2.67
RGPD3A6NKT7 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.66□□□□□ -2.68
RGPD3A6NKT7 RNU6-370P-201ENST00000411008 104 ntBASIC-1.66□□□□□ -2.68
RGPD3A6NKT7 MTCO2P27-201ENST00000420740 428 ntBASIC-1.66□□□□□ -2.68
RGPD3A6NKT7 MTATP6P14-201ENST00000455189 673 ntBASIC-1.66□□□□□ -2.68
RGPD3A6NKT7 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.66□□□□□ -2.68
RGPD3A6NKT7 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.66□□□□□ -2.68
RGPD3A6NKT7 AC022784.5-201ENST00000522241 437 ntBASIC-1.66□□□□□ -2.68
RGPD3A6NKT7 AL136370.1-201ENST00000608166 691 ntBASIC-1.66□□□□□ -2.68
RGPD3A6NKT7 RNU6-827P-201ENST00000365553 106 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 HMGN2P32-201ENST00000444648 269 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 AC079140.5-201ENST00000507882 310 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 RNU6-732P-201ENST00000516033 103 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 SNORA27.1-201ENST00000362604 124 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 SNORA20B-201ENST00000384220 132 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 MIR487A-201ENST00000385009 80 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 RNU6-830P-201ENST00000516353 107 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 AC090616.2-202ENST00000584248 222 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 AC004223.4-201ENST00000612426 332 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 MIR8066-201ENST00000617280 78 ntBASIC-1.67□□□□□ -2.68
RGPD3A6NKT7 RNU6-560P-201ENST00000364007 108 ntBASIC-1.68□□□□□ -2.68
RGPD3A6NKT7 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.68□□□□□ -2.68
RGPD3A6NKT7 USP9YP30-201ENST00000430729 455 ntBASIC-1.68□□□□□ -2.68
RGPD3A6NKT7 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.68□□□□□ -2.68
RGPD3A6NKT7 RNU7-67P-201ENST00000459003 62 ntBASIC-1.68□□□□□ -2.68
RGPD3A6NKT7 MTND4LP25-201ENST00000570218 163 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms