Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RNU6-440P-201ENST00000390882 105 ntBASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 RNA5SP109-201ENST00000391010 116 ntBASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 RNA5SP127-201ENST00000411051 133 ntBASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 RNU7-197P-201ENST00000458836 62 ntBASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 Y_RNA.757-201ENST00000578934 114 ntBASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 AC078899.2-201ENST00000595282 212 ntBASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 MIR8054-201ENST00000620877 86 ntBASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 AL161431.1-201ENST00000618966 4205 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 Y_RNA.336-201ENST00000365307 109 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 MIR520A-201ENST00000384862 85 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 MIR27B-201ENST00000385129 97 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 AL034345.1-201ENST00000407768 123 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 RPL32P35-201ENST00000415214 394 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 MTND4LP9-201ENST00000427694 174 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 AC008267.6-201ENST00000441664 139 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 UQCRHP3-201ENST00000451503 251 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 HMGN2P23-201ENST00000456759 269 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 RNA5SP217-201ENST00000515959 91 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 AC131055.1-201ENST00000584626 316 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 U7.2-201ENST00000607576 63 ntBASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM88BA6NKF7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 RNU6-1082P-201ENST00000364574 107 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 SNORA48.1-201ENST00000390879 135 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 MIR1287-201ENST00000408492 90 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 MIR1283-2-201ENST00000408621 87 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 SNRPGP13-201ENST00000442212 177 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 STAG3L5P-204ENST00000443759 179 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 RN7SL633P-201ENST00000488974 297 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 RNA5SP272-201ENST00000516095 111 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 RNU6-313P-201ENST00000516317 112 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 RNA5SP282-201ENST00000516355 108 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 MIR4529-201ENST00000578110 78 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 AL365205.2-201ENST00000594586 68 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 U4.3-201ENST00000621047 82 ntBASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TMEM88BA6NKF7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 SNORA20-201ENST00000384662 132 ntBASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 RNU2-51P-201ENST00000410708 197 ntBASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 AC007064.1-201ENST00000412238 351 ntBASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 RNA5SP320-201ENST00000516263 124 ntBASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 RNU6-479P-201ENST00000516348 105 ntBASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 MIR1273D-201ENST00000577266 86 ntBASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 ZNF861P-201ENST00000588126 639 ntBASIC3.12□□□□□ -1.91
TMEM88BA6NKF7 Y_RNA.66-201ENST00000362862 102 ntBASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 RNU6-888P-201ENST00000363010 101 ntBASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 RNU6-22P-201ENST00000384355 107 ntBASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 MIR624-201ENST00000385217 97 ntBASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 SNORD72-201ENST00000390994 80 ntBASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 RNU6-460P-201ENST00000391158 108 ntBASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 MTATP6P21-201ENST00000440681 189 ntBASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 RNU1-104P-201ENST00000517280 175 ntBASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.11□□□□□ -1.91
TMEM88BA6NKF7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 RNU6-915P-201ENST00000364943 103 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 RNU1-52P-201ENST00000384190 164 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 AL606517.2-201ENST00000442855 241 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 RNU6-1211P-201ENST00000459179 105 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 CYCTP-201ENST00000504253 315 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 RNU6-693P-201ENST00000516134 107 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 SNORD45.4-201ENST00000516629 73 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 RNA5SP481-201ENST00000516814 122 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 SNORD14A-201ENST00000606526 91 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.1□□□□□ -1.91
TMEM88BA6NKF7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TMEM88BA6NKF7 Y_RNA.120-201ENST00000363304 110 ntBASIC3.09□□□□□ -1.91
TMEM88BA6NKF7 SNORA63D-201ENST00000364359 132 ntBASIC3.09□□□□□ -1.91
TMEM88BA6NKF7 Y_RNA.251-201ENST00000364551 99 ntBASIC3.09□□□□□ -1.91
TMEM88BA6NKF7 RNU6-1292P-201ENST00000383856 107 ntBASIC3.09□□□□□ -1.91
TMEM88BA6NKF7 RNU6-163P-201ENST00000384396 106 ntBASIC3.09□□□□□ -1.91
TMEM88BA6NKF7 Y_RNA.692-201ENST00000516627 105 ntBASIC3.09□□□□□ -1.91
TMEM88BA6NKF7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
TMEM88BA6NKF7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 SNORD50B-201ENST00000364995 70 ntBASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 SNORA80E-201ENST00000384744 137 ntBASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 MIR524-201ENST00000385242 87 ntBASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 RNU6-1154P-201ENST00000391001 104 ntBASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 RN7SL442P-201ENST00000473804 320 ntBASIC3.08□□□□□ -1.92
TMEM88BA6NKF7 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms