Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Y_RNA.116-201ENST00000363292 103 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 MIR491-201ENST00000384877 84 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 RNU6-440P-201ENST00000390882 105 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 RNA5SP109-201ENST00000391010 116 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 RNU6-240P-201ENST00000516098 97 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 RNA5SP137-201ENST00000516833 135 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
SHISA3A0PJX4 AL161756.2-201ENST00000604597 246 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 AC027279.3-201ENST00000625055 122 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.57□□□□□ -2
SHISA3A0PJX4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.57□□□□□ -2
SHISA3A0PJX4 AL161431.1-201ENST00000618966 4205 ntBASIC2.57□□□□□ -2
SHISA3A0PJX4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHISA3A0PJX4 SNORD115-3-201ENST00000363100 82 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 Y_RNA.198-201ENST00000364013 98 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 SNORA38.1-201ENST00000364172 131 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 RNU6-690P-201ENST00000365242 106 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 Y_RNA.440-201ENST00000384120 114 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 SNORD38C-201ENST00000384381 69 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 RNU6-950P-201ENST00000384651 107 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 SNORD15B-201ENST00000384714 146 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 RNA5SP89-201ENST00000410300 108 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 STAG3L5P-204ENST00000443759 179 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 RN7SL863P-201ENST00000462370 296 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 AP003484.1-201ENST00000530974 250 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 AC245060.5-201ENST00000610778 3293 ntBASIC2.56□□□□□ -2
SHISA3A0PJX4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHISA3A0PJX4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHISA3A0PJX4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHISA3A0PJX4 RNU6-349P-201ENST00000362402 107 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 Y_RNA.85-201ENST00000363014 111 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 Y_RNA.213-201ENST00000364178 111 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 RNU1-133P-201ENST00000364867 167 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 RNU6-32P-201ENST00000383948 107 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 RNY1P6-201ENST00000384193 109 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 Y_RNA.454-201ENST00000384224 113 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 RNU6-13P-201ENST00000384248 107 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 SNORA54-201ENST00000384281 123 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 RNU1-148P-201ENST00000384472 162 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 RNU6-12P-201ENST00000384604 107 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 RNU6-41P-201ENST00000384741 107 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 AL627390.1-201ENST00000396055 340 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.55□□□□□ -2
SHISA3A0PJX4 RNU7-80P-201ENST00000459562 61 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.55□□□□□ -2
SHISA3A0PJX4 SNORD36C-201ENST00000516733 66 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.55□□□□□ -2
SHISA3A0PJX4 AC084364.2-201ENST00000546924 395 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 MIR4778-201ENST00000577635 80 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.55□□□□□ -2
SHISA3A0PJX4 AC005000.2-201ENST00000605468 310 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 AC015726.2-201ENST00000620112 122 ntBASIC2.55□□□□□ -2
SHISA3A0PJX4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SHISA3A0PJX4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SHISA3A0PJX4 RNU6-525P-201ENST00000363685 104 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 RNU6-1107P-201ENST00000364817 104 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 U8.9-201ENST00000365667 134 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 RNA5SP120-201ENST00000410900 112 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 RNU6-938P-201ENST00000411285 103 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.54□□□□□ -2
SHISA3A0PJX4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 Y_RNA.694-201ENST00000516677 117 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 uc_338.28-201ENST00000612082 187 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 MIR622-201ENST00000638396 96 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 AL442644.1-201ENST00000454390 3105 ntBASIC2.54□□□□□ -2
SHISA3A0PJX4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -2
SHISA3A0PJX4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.54□□□□□ -2
SHISA3A0PJX4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2
SHISA3A0PJX4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.53□□□□□ -2
SHISA3A0PJX4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.53□□□□□ -2
SHISA3A0PJX4 RNU1-91P-201ENST00000364746 163 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 SNORA9-201ENST00000384215 133 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 RNU6-163P-201ENST00000384396 106 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 RNU6-106P-201ENST00000384405 107 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 Y_RNA.495-201ENST00000384435 112 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 SNORD12C-201ENST00000386307 89 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 RN7SKP200-201ENST00000410564 320 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.53□□□□□ -2
SHISA3A0PJX4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.53□□□□□ -2
SHISA3A0PJX4 BX510359.4-201ENST00000423750 193 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 AC005326.1-201ENST00000429197 123 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 RNU7-26P-201ENST00000458980 63 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 AC003982.1-202ENST00000469928 248 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 AC114811.1-201ENST00000507207 168 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 RNU6-830P-201ENST00000516353 107 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 SNORA74D-201ENST00000516404 141 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 SCARNA13-201ENST00000516672 275 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 SNORA18.7-201ENST00000516910 131 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 AC107016.2-201ENST00000547968 190 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 AP006437.1-201ENST00000641440 3685 ntBASIC2.53□□□□□ -2
SHISA3A0PJX4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHISA3A0PJX4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2.01
SHISA3A0PJX4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.52□□□□□ -2.01
SHISA3A0PJX4 MIRLET7C-201ENST00000362160 84 ntBASIC2.52□□□□□ -2.01
SHISA3A0PJX4 MIR22-201ENST00000362190 85 ntBASIC2.52□□□□□ -2.01
SHISA3A0PJX4 Y_RNA.49-201ENST00000362714 112 ntBASIC2.52□□□□□ -2.01
SHISA3A0PJX4 RNU6-1255P-201ENST00000363434 112 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms