Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 MTCO2P33-201ENST00000402100 465 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 MIR1265-201ENST00000408444 86 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 RNU6-648P-201ENST00000410190 107 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 AC069271.1-201ENST00000445577 156 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 SNORA18.4-201ENST00000516440 124 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 RNU6-782P-201ENST00000516852 104 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 RNU6-448P-201ENST00000517052 107 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 RNU2-12P-201ENST00000517216 168 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 AC087685.1-201ENST00000587507 141 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 AC245884.10-201ENST00000597355 337 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 ZNF299P-201ENST00000406845 1804 ntBASIC-0.34□□□□□ -2.46
TRAV3A0A0B4J244 SNORD114-28-201ENST00000363610 72 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 SNORA26.5-201ENST00000391215 123 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 RNA5SP475-201ENST00000410568 110 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 MTATP6P13-201ENST00000438531 667 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 RNU7-62P-201ENST00000458856 62 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 MIR4802-201ENST00000581881 80 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-89P-201ENST00000606519 100 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 MIR7107-201ENST00000611489 80 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 AC007494.3-201ENST00000624660 743 ntBASIC-0.35□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 SNORA24-201ENST00000384096 131 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-364P-201ENST00000384387 107 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-847P-201ENST00000411115 108 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 RNU7-165P-201ENST00000458864 60 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-835P-201ENST00000516974 104 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 MIR4528-201ENST00000577763 90 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 AP001180.6-201ENST00000584918 159 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 AC124303.1-201ENST00000605703 360 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 MIR8064-201ENST00000612863 90 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 AC098679.4-201ENST00000624241 654 ntBASIC-0.36□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 SNORD14E-201ENST00000364009 85 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 SNORA1.2-201ENST00000365189 134 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-46P-201ENST00000383860 107 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 SNORA69-201ENST00000383895 132 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 SNORA72-201ENST00000384339 132 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 MIR593-201ENST00000384856 100 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 RNU2-61P-201ENST00000411069 191 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 Z95118.1-201ENST00000421372 247 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 RNU7-185P-201ENST00000459215 60 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-625P-201ENST00000459412 107 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 RNU7-156P-201ENST00000517214 74 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 AC019193.3-201ENST00000609144 554 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 AC087588.2-201ENST00000617667 426 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 MIR6740-201ENST00000618268 113 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 SNORD38B-202ENST00000625943 69 ntBASIC-0.37□□□□□ -2.47
TRAV3A0A0B4J244 RNY1P16-201ENST00000363063 111 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-324P-201ENST00000363957 106 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 RNA5SP128-201ENST00000365305 116 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-929P-201ENST00000384429 107 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 AC090844.1-201ENST00000422019 156 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 SNORD4A-201ENST00000459174 72 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 snoU13.16-201ENST00000459350 104 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 AC083904.1-201ENST00000487828 231 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 MTATP6P24-201ENST00000576835 677 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 MIR5701-3-201ENST00000578890 82 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 MIR5701-1-201ENST00000585138 82 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 MIR5701-2-201ENST00000615634 82 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 AC097520.1-201ENST00000624435 385 ntBASIC-0.38□□□□□ -2.47
TRAV3A0A0B4J244 SNORA18.1-201ENST00000363418 128 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-268P-201ENST00000364174 107 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-442P-201ENST00000383968 104 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 MIR643-201ENST00000385267 97 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 AL512326.2-201ENST00000426359 151 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 HMGN2P22-201ENST00000427588 175 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 MTND3P3-201ENST00000505004 126 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 AC040904.1-201ENST00000590850 223 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 AC005176.2-201ENST00000596933 147 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 AC005972.2-201ENST00000604690 348 ntBASIC-0.39□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.4□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.4□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.4□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.4□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.4□□□□□ -2.47
TRAV3A0A0B4J244 MIR563-201ENST00000385080 79 ntBASIC-0.4□□□□□ -2.47
TRAV3A0A0B4J244 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.4□□□□□ -2.47
TRAV3A0A0B4J244 AL445567.1-201ENST00000439121 144 ntBASIC-0.4□□□□□ -2.47
TRAV3A0A0B4J244 RNU7-66P-201ENST00000459469 62 ntBASIC-0.4□□□□□ -2.47
TRAV3A0A0B4J244 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms