Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 Y_RNA.718-201ENST00000517110 102 ntBASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC006600.1-201ENST00000572529 153 ntBASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC011712.1-201ENST00000588959 234 ntBASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 DEFB117-201ENST00000602356 141 ntBASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Z83818.1-201ENST00000603584 150 ntBASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC244015.1-201ENST00000622301 99 ntBASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC006435.5-201ENST00000624486 112 ntBASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MIR4272-201ENST00000635924 64 ntBASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-833P-201ENST00000363486 107 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 SNORD45.3-201ENST00000363836 72 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-801P-201ENST00000364087 105 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.238-201ENST00000364441 102 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.265-201ENST00000364677 108 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-593P-201ENST00000364716 112 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 SNORA2.2-201ENST00000365473 135 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.498-201ENST00000384460 102 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-376P-201ENST00000384731 106 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.570-201ENST00000384750 101 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 SNORD72-201ENST00000390994 80 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU2-54P-201ENST00000410299 190 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC107399.1-201ENST00000451226 265 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC245047.8-201ENST00000456455 284 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU7-152P-201ENST00000458982 64 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-1198P-201ENST00000516904 67 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC023827.1-201ENST00000569247 97 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MIR4659A-201ENST00000580269 81 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MIR5188-201ENST00000583467 113 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC131055.1-201ENST00000584626 316 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC120024.3-201ENST00000603167 156 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC006380.1-201ENST00000603598 186 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC022441.3-201ENST00000605737 136 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 SNORA28-201ENST00000606769 126 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-94P-201ENST00000607728 107 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC093913.1-201ENST00000614178 329 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC243829.3-201ENST00000622177 108 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC112487.2-201ENST00000637950 304 ntBASIC0.33□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MTND4P29-201ENST00000503122 1372 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.31-201ENST00000362574 102 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNA5SP264-201ENST00000363115 107 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 SNORD68-201ENST00000363214 84 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 U8.7-201ENST00000364940 136 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC117470.1-201ENST00000381974 330 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.418-201ENST00000384029 102 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-1013P-201ENST00000384180 107 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.458-201ENST00000384240 102 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNY3P14-201ENST00000384309 102 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNY3P4-201ENST00000384428 101 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.529-201ENST00000384586 119 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.577-201ENST00000384794 101 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNY4P36-201ENST00000391116 96 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 SNORA26.5-201ENST00000391215 123 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.645-201ENST00000391229 102 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU4-30P-201ENST00000410245 143 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-121P-201ENST00000410525 99 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AL139396.1-201ENST00000421137 167 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.632-201ENST00000459189 102 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-559P-201ENST00000516151 98 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 SNORD111.1-201ENST00000516421 86 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC036111.3-201ENST00000526389 112 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AP002004.2-201ENST00000531656 154 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MIR548AR-201ENST00000582191 57 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RBM11P1-201ENST00000604951 799 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MIR6516-201ENST00000630554 81 ntBASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.796-201ENST00000364268 102 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.799-201ENST00000364992 102 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-937P-201ENST00000384325 106 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.573-201ENST00000384763 105 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-308P-201ENST00000390957 107 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-700P-201ENST00000391043 107 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MIR320B2-201ENST00000408479 138 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 MIR1287-201ENST00000408492 90 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 BTF3P11-201ENST00000426582 477 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 U7.7-201ENST00000459276 60 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-155P-201ENST00000516347 100 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-875P-201ENST00000516488 106 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU2-56P-201ENST00000516826 190 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 SNORA18.7-201ENST00000516910 131 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AL358944.1-201ENST00000528537 144 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC109810.1-201ENST00000534066 224 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AL355375.2-201ENST00000574825 175 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC007485.1-201ENST00000616755 206 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC099654.14-201ENST00000638599 341 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 AC134026.1-201ENST00000623249 2239 ntBASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU6-1266P-201ENST00000362794 105 ntBASIC0.3□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 Y_RNA.148-201ENST00000363557 117 ntBASIC0.3□□□□□ -2.36
IGKV1D-43A0A0B4J1Z2 RNU4-50P-201ENST00000364361 141 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms