Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.29■□□□□ 0.68
Mre11Q61216 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
Mre11Q61216 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Mre11Q61216 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.28■□□□□ 0.68
Mre11Q61216 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.28■□□□□ 0.68
Mre11Q61216 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.28■□□□□ 0.68
Mre11Q61216 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Mre11Q61216 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Mre11Q61216 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mre11Q61216 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.27■□□□□ 0.68
Mre11Q61216 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Mre11Q61216 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.27■□□□□ 0.68
Mre11Q61216 Gm18025-201ENSMUST00000221733 862 ntBASIC19.27■□□□□ 0.68
Mre11Q61216 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mre11Q61216 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.27■□□□□ 0.68
Mre11Q61216 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mre11Q61216 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mre11Q61216 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Mre11Q61216 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mre11Q61216 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mre11Q61216 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mre11Q61216 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mre11Q61216 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.26■□□□□ 0.67
Mre11Q61216 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mre11Q61216 Gm29257-201ENSMUST00000186115 639 ntBASIC19.26■□□□□ 0.67
Mre11Q61216 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mre11Q61216 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.26■□□□□ 0.67
Mre11Q61216 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Mre11Q61216 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Mre11Q61216 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mre11Q61216 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Mre11Q61216 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mre11Q61216 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mre11Q61216 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.25■□□□□ 0.67
Mre11Q61216 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.25■□□□□ 0.67
Mre11Q61216 Gm4968-201ENSMUST00000071458 858 ntBASIC19.25■□□□□ 0.67
Mre11Q61216 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Mre11Q61216 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mre11Q61216 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.25■□□□□ 0.67
Mre11Q61216 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Mre11Q61216 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Mre11Q61216 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms