Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC013791.1-201ENST00000616619 62 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 RNY4P28-201ENST00000365281 93 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.515-201ENST00000384535 112 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 SNORA40.19-201ENST00000390846 128 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 RNA5SP450-201ENST00000411206 102 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 AL158823.1-201ENST00000418441 478 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 AC091021.1-201ENST00000468051 388 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 AC107393.1-201ENST00000512403 346 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 RNY3P16-201ENST00000516338 101 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 RNU6-794P-201ENST00000517261 64 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 MIR5692C2-201ENST00000577959 77 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 POLR3GP1-201ENST00000594073 261 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 AL078604.3-201ENST00000615580 211 ntBASIC1.8□□□□□ -2.12
SMARCAL1Q9NZC9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 RNU4-13P-201ENST00000364019 141 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 RNY1-201ENST00000364228 113 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 RNU4-10P-201ENST00000364383 140 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.274-201ENST00000364714 101 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 RNA5SP465-201ENST00000391195 109 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 MIR1298-201ENST00000408783 112 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 RNA5SP501-201ENST00000410990 112 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 RNU6-847P-201ENST00000411115 108 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.626-201ENST00000411288 95 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 RPS4XP11-201ENST00000446897 772 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 RNU7-115P-201ENST00000516433 55 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 AC024405.2-202ENST00000532731 184 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 AL773524.1-201ENST00000614065 229 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 AC073349.3-201ENST00000617616 186 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 MIR548AY-201ENST00000617669 107 ntBASIC1.79□□□□□ -2.12
SMARCAL1Q9NZC9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 RNU6-899P-201ENST00000363947 107 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.200-201ENST00000364018 102 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 RNU6-1323P-201ENST00000384025 107 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 AC010154.1-201ENST00000425857 269 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 AL606517.2-201ENST00000442855 241 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 RNU6-1291P-201ENST00000516591 104 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 AC084364.2-201ENST00000546924 395 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 AC091178.2-201ENST00000584401 117 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 AL365265.1-201ENST00000621045 234 ntBASIC1.78□□□□□ -2.12
SMARCAL1Q9NZC9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
SMARCAL1Q9NZC9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.199-201ENST00000364014 102 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.293-201ENST00000364908 93 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.308-201ENST00000365043 101 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.572-201ENST00000384757 98 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 SNORA36B-201ENST00000410438 131 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 AC244636.1-201ENST00000421152 228 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 AC245047.4-201ENST00000433189 144 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 RPL36AP21-201ENST00000490372 323 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-138P-201ENST00000515952 107 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-1096P-201ENST00000517089 102 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 DEFB122-202ENST00000569013 197 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 MIR4769-201ENST00000584126 77 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 AP003357.1-201ENST00000604497 148 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 MIR8081-201ENST00000611533 95 ntBASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SMARCAL1Q9NZC9 AC018630.2-201ENST00000534866 2403 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.83-201ENST00000363005 113 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.267-201ENST00000364679 109 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-923P-201ENST00000364753 107 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 MIR515-2-201ENST00000384883 83 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 MIR515-1-201ENST00000384884 83 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 U8.13-201ENST00000390842 128 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 RNA5SP109-201ENST00000391010 116 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 AC233266.1-201ENST00000454518 96 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 RPS26P45-201ENST00000471748 340 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 RPL23AP54-201ENST00000495129 419 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 AC024995.1-201ENST00000523014 93 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 AC127455.1-201ENST00000565496 145 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 AL929325.1-201ENST00000603096 117 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 AC069114.2-201ENST00000604699 304 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 AC242852.1-201ENST00000612151 96 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 AC244015.1-201ENST00000622301 99 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 MIR6079-201ENST00000635807 62 ntBASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-653P-201ENST00000363074 106 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-1205P-201ENST00000363625 106 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-200P-201ENST00000364743 107 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.297-201ENST00000364950 91 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.304-201ENST00000365011 112 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 SNORA48.1-201ENST00000390879 135 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-907P-201ENST00000390924 102 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-383P-201ENST00000410864 94 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 MTND5P15-201ENST00000434246 349 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms