Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 Y_RNA.7-201ENST00000362352 102 ntBASIC1.89□□□□□ -2.11
PKP4Q99569 Y_RNA.240-201ENST00000364469 95 ntBASIC1.89□□□□□ -2.11
PKP4Q99569 Y_RNA.571-201ENST00000384753 98 ntBASIC1.89□□□□□ -2.11
PKP4Q99569 HSPE1P21-201ENST00000438283 308 ntBASIC1.89□□□□□ -2.11
PKP4Q99569 RPL36AP21-201ENST00000490372 323 ntBASIC1.89□□□□□ -2.11
PKP4Q99569 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PKP4Q99569 AL137100.2-201ENST00000555786 315 ntBASIC1.89□□□□□ -2.11
PKP4Q99569 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.89□□□□□ -2.11
PKP4Q99569 AC068647.2-201ENST00000637380 353 ntBASIC1.89□□□□□ -2.11
PKP4Q99569 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PKP4Q99569 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PKP4Q99569 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
PKP4Q99569 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
PKP4Q99569 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.88□□□□□ -2.11
PKP4Q99569 AL356292.1-201ENST00000283110 373 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 MIR340-201ENST00000362125 95 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 RNU6-23P-201ENST00000363283 107 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 Y_RNA.121-201ENST00000363309 113 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 RNU6-1205P-201ENST00000363625 106 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 Y_RNA.293-201ENST00000364908 93 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 RNU6-144P-201ENST00000383951 107 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 SNORA8.3-201ENST00000384679 139 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 MIR548M-201ENST00000408260 86 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 RPS27P22-201ENST00000478056 241 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 AC010409.1-201ENST00000487382 476 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.88□□□□□ -2.11
PKP4Q99569 AC074198.2-201ENST00000508153 258 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 RNU6-1219P-201ENST00000516143 112 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 RNU7-115P-201ENST00000516433 55 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 RNU6-1212P-201ENST00000517023 104 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 AC004832.4-201ENST00000608952 331 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 Y_RNA.802-201ENST00000614892 130 ntBASIC1.88□□□□□ -2.11
PKP4Q99569 AC068700.1-201ENST00000565862 3754 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 SNORD114-1-201ENST00000362705 72 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 Y_RNA.238-201ENST00000364441 102 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 U8.7-201ENST00000364940 136 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 RNU6-1323P-201ENST00000384025 107 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 SNORD116-13-201ENST00000384408 92 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 MIR626-201ENST00000385032 94 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 MIR526A2-201ENST00000390198 65 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 MIR1253-201ENST00000408273 105 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 RN7SKP51-201ENST00000410781 304 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.87□□□□□ -2.11
PKP4Q99569 MRPS18CP4-201ENST00000535821 231 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 MIR3169-201ENST00000578032 83 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 MIR5688-201ENST00000580619 83 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 AC005786.1-201ENST00000588553 154 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 AC005972.2-201ENST00000604690 348 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 MIR548AY-201ENST00000617669 107 ntBASIC1.87□□□□□ -2.11
PKP4Q99569 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.87□□□□□ -2.11
PKP4Q99569 RNA5SP493-201ENST00000364115 91 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 RNU6-381P-201ENST00000391259 108 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 AC060773.1-201ENST00000421698 310 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.86□□□□□ -2.11
PKP4Q99569 AC117454.1-201ENST00000491120 168 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 RN7SKP164-201ENST00000516138 266 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 RNU6-1146P-201ENST00000516282 102 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 RNU6-63P-201ENST00000516690 95 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 RNU7-116P-201ENST00000516940 62 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 MIR4438-201ENST00000585271 93 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 AP003357.1-201ENST00000604497 148 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 RNU2-4P-201ENST00000606190 192 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 MIR7843-201ENST00000622274 79 ntBASIC1.86□□□□□ -2.11
PKP4Q99569 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
PKP4Q99569 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.86□□□□□ -2.11
PKP4Q99569 RNU1-22P-201ENST00000363334 158 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 RNU4-10P-201ENST00000364383 140 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 RNU6-117P-201ENST00000365415 107 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PKP4Q99569 SNORA36B-201ENST00000410438 131 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.85□□□□□ -2.11
PKP4Q99569 AC011406.1-201ENST00000512440 370 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 RNU6-1278P-201ENST00000516130 107 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 POLR3GP1-201ENST00000594073 261 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 AC103810.8-201ENST00000607347 118 ntBASIC1.85□□□□□ -2.11
PKP4Q99569 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
PKP4Q99569 MIR367-201ENST00000362299 68 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 Y_RNA.24-201ENST00000362508 103 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 Y_RNA.75-201ENST00000362927 97 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 RNU6-103P-201ENST00000363686 107 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 Y_RNA.182-201ENST00000363880 111 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 RNU4-13P-201ENST00000364019 141 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 RNA5SP511-201ENST00000410487 115 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 AL162725.1-201ENST00000435405 301 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 HMGN2P34-201ENST00000437647 269 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 AC097462.1-201ENST00000514125 324 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 RNU6-255P-201ENST00000516957 105 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 RNU7-172P-201ENST00000517125 64 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 AC015720.1-201ENST00000565251 277 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 AC127455.1-201ENST00000565496 145 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 MIR4724-201ENST00000579485 89 ntBASIC1.84□□□□□ -2.11
PKP4Q99569 U6.73-201ENST00000619194 103 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms