Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS50Q96JG6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
VPS50Q96JG6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS50Q96JG6 MIR411-201ENST00000362239 96 ntBASIC2.07□□□□□ -2.08
VPS50Q96JG6 RNU6-1205P-201ENST00000363625 106 ntBASIC2.07□□□□□ -2.08
VPS50Q96JG6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VPS50Q96JG6 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
VPS50Q96JG6 SNORA48.1-201ENST00000390879 135 ntBASIC2.07□□□□□ -2.08
VPS50Q96JG6 RNA5SP109-201ENST00000391010 116 ntBASIC2.07□□□□□ -2.08
VPS50Q96JG6 AC010154.1-201ENST00000425857 269 ntBASIC2.07□□□□□ -2.08
VPS50Q96JG6 MTND5P15-201ENST00000434246 349 ntBASIC2.07□□□□□ -2.08
VPS50Q96JG6 AC100767.1-201ENST00000528178 123 ntBASIC2.07□□□□□ -2.08
VPS50Q96JG6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VPS50Q96JG6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS50Q96JG6 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 Y_RNA.267-201ENST00000364679 109 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 MIR1278-201ENST00000408753 81 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 AL158823.1-201ENST00000418441 478 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 AC018634.1-201ENST00000437554 401 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 RPS27P1-201ENST00000450552 247 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 AL021397.1-201ENST00000451806 248 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 AC233266.1-201ENST00000454518 96 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 AC024995.1-201ENST00000523014 93 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 AC011604.1-201ENST00000545978 196 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 MIR4299-201ENST00000577899 72 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 MIR4308-201ENST00000580634 81 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 AC242852.1-201ENST00000612151 96 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 AC244015.1-201ENST00000622301 99 ntBASIC2.06□□□□□ -2.08
VPS50Q96JG6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS50Q96JG6 Y_RNA.262-201ENST00000364641 102 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 RNU6-1080P-201ENST00000383982 107 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 SNORA72-201ENST00000384339 132 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 MIR515-2-201ENST00000384883 83 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 MIR515-1-201ENST00000384884 83 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 MT-TR-201ENST00000387439 65 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 RPL23AP6-201ENST00000446637 472 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 COX6CP14-201ENST00000469580 174 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 AC022559.1-201ENST00000520905 205 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS50Q96JG6 AC012493.3-201ENST00000604494 112 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 AC069114.2-201ENST00000604699 304 ntBASIC2.05□□□□□ -2.08
VPS50Q96JG6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS50Q96JG6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS50Q96JG6 Y_RNA.24-201ENST00000362508 103 ntBASIC2.04□□□□□ -2.08
VPS50Q96JG6 SNORD114-1-201ENST00000362705 72 ntBASIC2.04□□□□□ -2.08
VPS50Q96JG6 RNU6-1019P-201ENST00000364424 107 ntBASIC2.04□□□□□ -2.08
VPS50Q96JG6 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
VPS50Q96JG6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS50Q96JG6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS50Q96JG6 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
VPS50Q96JG6 RNU7-116P-201ENST00000516940 62 ntBASIC2.04□□□□□ -2.08
VPS50Q96JG6 AC100821.1-201ENST00000523153 2479 ntBASIC2.04□□□□□ -2.08
VPS50Q96JG6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS50Q96JG6 SUB1P4-201ENST00000566062 339 ntBASIC2.04□□□□□ -2.08
VPS50Q96JG6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS50Q96JG6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VPS50Q96JG6 snoU2_19.4-201ENST00000364329 80 ntBASIC2.03□□□□□ -2.08
VPS50Q96JG6 MIR520G-201ENST00000385064 90 ntBASIC2.03□□□□□ -2.08
VPS50Q96JG6 AC019129.1-201ENST00000403786 261 ntBASIC2.03□□□□□ -2.08
VPS50Q96JG6 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
VPS50Q96JG6 Y_RNA.621-201ENST00000411065 96 ntBASIC2.03□□□□□ -2.08
VPS50Q96JG6 Y_RNA.644-201ENST00000459006 113 ntBASIC2.03□□□□□ -2.08
VPS50Q96JG6 RNU6-437P-201ENST00000459408 95 ntBASIC2.03□□□□□ -2.08
VPS50Q96JG6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS50Q96JG6 Y_RNA.674-201ENST00000516362 113 ntBASIC2.03□□□□□ -2.08
VPS50Q96JG6 CBX3P4-201ENST00000538909 354 ntBASIC2.03□□□□□ -2.08
VPS50Q96JG6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS50Q96JG6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
VPS50Q96JG6 SNORA1B-201ENST00000362535 133 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 RNU6-112P-201ENST00000363599 104 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 SNORA4.2-201ENST00000365313 147 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 RNU6-969P-201ENST00000383900 105 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 RNU6-296P-201ENST00000384608 107 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 MIR626-201ENST00000385032 94 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VPS50Q96JG6 RNU6-918P-201ENST00000391219 106 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 COX6CP10-201ENST00000416832 224 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS50Q96JG6 MTND2P29-201ENST00000438595 412 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS50Q96JG6 AC107393.1-201ENST00000512403 346 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 SCARNA8-201ENST00000515924 131 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 RNU6-341P-201ENST00000516973 96 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 SNORA81.3-201ENST00000517283 198 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS50Q96JG6 MIR5002-201ENST00000584713 97 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 Y_RNA.802-201ENST00000614892 130 ntBASIC2.02□□□□□ -2.09
VPS50Q96JG6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS50Q96JG6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS50Q96JG6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS50Q96JG6 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 RNU6-144P-201ENST00000383951 107 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 SNORA8.3-201ENST00000384679 139 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 RNA5SP100-201ENST00000410903 110 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 RNA5SP59-201ENST00000410922 110 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 AC245047.3-201ENST00000429428 127 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms