Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.19□□□□□ -2.44
TTC28Q96AY4 AC026470.2-201ENST00000561492 181 ntBASIC-0.19□□□□□ -2.44
TTC28Q96AY4 AC245014.2-201ENST00000603689 287 ntBASIC-0.19□□□□□ -2.44
TTC28Q96AY4 AP000942.4-201ENST00000604811 241 ntBASIC-0.19□□□□□ -2.44
TTC28Q96AY4 AC246785.4-201ENST00000605374 287 ntBASIC-0.19□□□□□ -2.44
TTC28Q96AY4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.19□□□□□ -2.44
TTC28Q96AY4 RNU6-161P-201ENST00000363051 106 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 RNU6-715P-201ENST00000365204 103 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.2□□□□□ -2.44
TTC28Q96AY4 MRPL42P2-201ENST00000403169 426 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AL663109.1-201ENST00000411498 844 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 ELOCP21-201ENST00000412558 336 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 MTATP6P20-201ENST00000414147 562 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 ELOCP4-201ENST00000420090 333 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AL139396.1-201ENST00000421137 167 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.2□□□□□ -2.44
TTC28Q96AY4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC097462.1-201ENST00000514125 324 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 RNU6-311P-201ENST00000516224 102 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.2□□□□□ -2.44
TTC28Q96AY4 MIR548AO-201ENST00000579992 96 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC234772.3-201ENST00000602277 528 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC137590.2-201ENST00000619709 240 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC023510.2-201ENST00000622162 746 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC006435.5-201ENST00000624486 112 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AL606845.1-201ENST00000404881 255 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AL355143.1-201ENST00000407101 841 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.2□□□□□ -2.44
TTC28Q96AY4 MTCO2P23-201ENST00000425216 680 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AL512326.2-201ENST00000426359 151 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC015818.7-201ENST00000428754 109 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC087499.7-201ENST00000441958 109 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 UQCRBP2-201ENST00000447827 297 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 RNU2-60P-201ENST00000517290 128 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.2□□□□□ -2.44
TTC28Q96AY4 MTCO3P23-201ENST00000561363 289 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC006600.1-201ENST00000572529 153 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 Z94722.1-201ENST00000604328 474 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 MIR3666-201ENST00000607845 111 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC010999.1-201ENST00000611856 324 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 AC009878.1-201ENST00000621819 340 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 U6.114-201ENST00000636407 96 ntBASIC-0.2□□□□□ -2.44
TTC28Q96AY4 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 SNORA72.1-201ENST00000363485 129 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 SNORD116.1-201ENST00000365628 92 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 MIR889-201ENST00000401280 79 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 SNORD100-201ENST00000408573 76 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 SNORA19.3-201ENST00000516165 130 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC022616.6-201ENST00000520479 119 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.21□□□□□ -2.44
TTC28Q96AY4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC090617.3-201ENST00000573670 475 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC100830.2-201ENST00000581636 240 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 MIR4743-201ENST00000584576 69 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC063944.3-201ENST00000609969 533 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC027807.2-201ENST00000616099 408 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC098679.4-201ENST00000624241 654 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AL008636.1-201ENST00000625038 1018 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC091948.2-201ENST00000636510 279 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 MIR487B-201ENST00000385021 84 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC007215.1-201ENST00000464893 276 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC107401.1-201ENST00000503426 685 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 RNU4-49P-201ENST00000516080 140 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 RNU7-172P-201ENST00000517125 64 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC069113.1-201ENST00000517763 267 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 AC090617.8-201ENST00000623339 167 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.21□□□□□ -2.44
TTC28Q96AY4 MIR4251-201ENST00000635819 61 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 MIR382-201ENST00000637119 76 ntBASIC-0.21□□□□□ -2.44
TTC28Q96AY4 SNORA2.1-201ENST00000363089 137 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-403P-201ENST00000363163 104 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 MTND1P11-201ENST00000456661 876 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU7-134P-201ENST00000458997 64 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-966P-201ENST00000516479 104 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 AC010608.3-201ENST00000625048 527 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-580P-201ENST00000365159 107 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 AC117470.1-201ENST00000381974 330 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-815P-201ENST00000384080 113 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-434P-201ENST00000384376 107 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 306.5 ms