Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 MLLT10P1-201ENST00000418346 262 ntBASIC1.81□□□□□ -2.12
NPIPB3Q92617 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.81□□□□□ -2.12
NPIPB3Q92617 Z98949.2-201ENST00000440996 144 ntBASIC1.81□□□□□ -2.12
NPIPB3Q92617 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.81□□□□□ -2.12
NPIPB3Q92617 MRPS17P9-201ENST00000511924 393 ntBASIC1.81□□□□□ -2.12
NPIPB3Q92617 RN7SKP164-201ENST00000516138 266 ntBASIC1.81□□□□□ -2.12
NPIPB3Q92617 RNA5SP24-201ENST00000516478 95 ntBASIC1.81□□□□□ -2.12
NPIPB3Q92617 RNA5SP148-201ENST00000516527 94 ntBASIC1.81□□□□□ -2.12
NPIPB3Q92617 AC087685.1-201ENST00000587507 141 ntBASIC1.81□□□□□ -2.12
NPIPB3Q92617 AL033523.1-201ENST00000605153 153 ntBASIC1.81□□□□□ -2.12
NPIPB3Q92617 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NPIPB3Q92617 Y_RNA.229-201ENST00000364347 113 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 Y_RNA.274-201ENST00000364714 101 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 Y_RNA.297-201ENST00000364950 91 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 SNORA12.1-201ENST00000390873 148 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 RNU6-381P-201ENST00000391259 108 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 RNU6-493P-201ENST00000391321 108 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 SNORD11-201ENST00000459124 84 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 AC099513.1-201ENST00000490423 301 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 RNA5SP356-201ENST00000515972 94 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 Y_RNA.700-201ENST00000516806 100 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.8□□□□□ -2.12
NPIPB3Q92617 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPIPB3Q92617 AC103810.6-201ENST00000606708 136 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 AL021707.8-201ENST00000609428 183 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 AC046143.2-201ENST00000609789 160 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 AL391903.3-201ENST00000612158 163 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 AL513423.1-201ENST00000621695 132 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 MIR6766-201ENST00000622641 72 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.8□□□□□ -2.12
NPIPB3Q92617 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPIPB3Q92617 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPIPB3Q92617 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPIPB3Q92617 ZNF720P1-201ENST00000562403 1939 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NPIPB3Q92617 RNU6-1020P-201ENST00000363684 107 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 Y_RNA.242-201ENST00000364473 110 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 RNU6-923P-201ENST00000364753 107 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 SNORA70.4-201ENST00000365509 134 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 RNU6-439P-201ENST00000384188 106 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 RNU6-424P-201ENST00000384367 105 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 MIR616-201ENST00000385293 97 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NPIPB3Q92617 JTBP1-201ENST00000441314 247 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 PGBD4P5-201ENST00000445958 426 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 AC108938.1-201ENST00000451204 136 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 AL138752.1-201ENST00000452964 351 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 CYCTP-201ENST00000504253 315 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 AC234781.5-201ENST00000508429 271 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.79□□□□□ -2.12
NPIPB3Q92617 RNU6-138P-201ENST00000515952 107 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 RNY3P16-201ENST00000516338 101 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
NPIPB3Q92617 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NPIPB3Q92617 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
NPIPB3Q92617 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NPIPB3Q92617 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NPIPB3Q92617 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NPIPB3Q92617 RNU6-1123P-201ENST00000362347 106 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 Y_RNA.7-201ENST00000362352 102 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 RNU6-103P-201ENST00000363686 107 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 SNORA80A-201ENST00000363922 136 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 Y_RNA.572-201ENST00000384757 98 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 RNU6-907P-201ENST00000390924 102 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 SNORA11.1-201ENST00000408133 129 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 MIR1267-201ENST00000408723 78 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 CALM2P4-201ENST00000430810 426 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 AC104435.1-201ENST00000483483 166 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.78□□□□□ -2.12
NPIPB3Q92617 RNA5SP168-201ENST00000516642 112 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 SNORA44.1-201ENST00000517031 108 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 MIR5007-201ENST00000583098 95 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 AC120024.3-201ENST00000603167 156 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 MIR8074-201ENST00000615081 81 ntBASIC1.78□□□□□ -2.12
NPIPB3Q92617 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.78□□□□□ -2.12
NPIPB3Q92617 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.78□□□□□ -2.12
NPIPB3Q92617 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NPIPB3Q92617 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
NPIPB3Q92617 MIR424-201ENST00000362227 98 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 RNU6-1084P-201ENST00000362498 107 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 snoU2_19.4-201ENST00000364329 80 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 snoU2-30.1-201ENST00000365012 70 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 RNY3P5-201ENST00000384127 102 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
NPIPB3Q92617 U8.16-201ENST00000391279 133 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 RN7SKP192-201ENST00000411291 327 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.77□□□□□ -2.13
NPIPB3Q92617 Y_RNA.644-201ENST00000459006 113 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 RPL23AP42-201ENST00000471152 471 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 Y_RNA.674-201ENST00000516362 113 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 MIR514B-201ENST00000516774 80 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 EIF4BP1-201ENST00000554881 351 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 AL049861.1-201ENST00000603130 150 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.77□□□□□ -2.13
NPIPB3Q92617 uc_338.4-201ENST00000616635 176 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 AC027279.3-201ENST00000625055 122 ntBASIC1.77□□□□□ -2.13
NPIPB3Q92617 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms