Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC022217.4-201ENST00000604389 163 ntBASIC1.53□□□□□ -2.16
LRRTM1Q86UE6 U1.36-201ENST00000620684 176 ntBASIC1.53□□□□□ -2.16
LRRTM1Q86UE6 AL365265.1-201ENST00000621045 234 ntBASIC1.53□□□□□ -2.16
LRRTM1Q86UE6 SNORA72.4-201ENST00000384174 132 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 RNA5SP100-201ENST00000410903 110 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 RNA5SP59-201ENST00000410922 110 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 AC244636.1-201ENST00000421152 228 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 AC003989.2-201ENST00000440224 169 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 RPL23AP6-201ENST00000446637 472 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 RNU7-141P-201ENST00000459304 62 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 RPL23AP42-201ENST00000471152 471 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 RPL23AP63-201ENST00000498752 471 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 MRPS17P9-201ENST00000511924 393 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 SNORA81.3-201ENST00000517283 198 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 DEFB122-202ENST00000569013 197 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 AC091178.2-201ENST00000584401 117 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 AL359075.3-201ENST00000613288 217 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 AC004792.1-201ENST00000614523 137 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 AC068647.2-201ENST00000637380 353 ntBASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
LRRTM1Q86UE6 RNU6-653P-201ENST00000363074 106 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RNU6-112P-201ENST00000363599 104 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 SNORA4.2-201ENST00000365313 147 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 Y_RNA.456-201ENST00000384232 111 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RNU6-296P-201ENST00000384608 107 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RNU6-376P-201ENST00000384731 106 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RNA5SP323-201ENST00000391094 133 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RNA5SP212-201ENST00000391223 107 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RNU6-710P-201ENST00000410424 105 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 AL445685.2-201ENST00000422551 342 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 OOSP1P1-201ENST00000423265 274 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 AL162725.1-201ENST00000435405 301 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RPS4XP11-201ENST00000446897 772 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 Y_RNA.644-201ENST00000459006 113 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RNA5SP57-201ENST00000459463 123 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 AC117454.1-201ENST00000491120 168 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 AC074198.2-201ENST00000508153 258 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 Y_RNA.674-201ENST00000516362 113 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RNU1-142P-201ENST00000516682 145 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 RNA5SP437-201ENST00000517249 129 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 CBX3P4-201ENST00000538909 354 ntBASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LRRTM1Q86UE6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 SNORA12.1-201ENST00000390873 148 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 COX6CP10-201ENST00000416832 224 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 PIGPP3-201ENST00000425307 415 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 HSPE1P9-201ENST00000440046 311 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 SNORA31.10-201ENST00000516482 106 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 RNU6-1291P-201ENST00000516591 104 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 MIR4648-201ENST00000580107 72 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 AC069114.2-201ENST00000604699 304 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 AC013791.1-201ENST00000616619 62 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 AC073349.3-201ENST00000617616 186 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 MIR6079-201ENST00000635807 62 ntBASIC1.5□□□□□ -2.17
LRRTM1Q86UE6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 RNU6-918P-201ENST00000391219 106 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 PCNPP3-201ENST00000393579 471 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 SNORA11.2-201ENST00000408318 127 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 MIR548I3-201ENST00000408378 149 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 MIR1278-201ENST00000408753 81 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 MIR548I1-201ENST00000408810 149 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 RNU6-383P-201ENST00000410864 94 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 HSPE1P21-201ENST00000438283 308 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 RNU6-1278P-201ENST00000516130 107 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 RNU7-115P-201ENST00000516433 55 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 RNU6-861P-201ENST00000516745 106 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 MIR5692C2-201ENST00000577959 77 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 AL929325.1-201ENST00000603096 117 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 AC005972.2-201ENST00000604690 348 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 AC018630.2-201ENST00000534866 2403 ntBASIC1.49□□□□□ -2.17
LRRTM1Q86UE6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 RNU6-682P-201ENST00000363843 106 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 snoU2_19.4-201ENST00000364329 80 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 SNORA63D-201ENST00000364359 132 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 Y_RNA.267-201ENST00000364679 109 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 Y_RNA.304-201ENST00000365011 112 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 Y_RNA.793-201ENST00000411222 111 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 AC010154.1-201ENST00000425857 269 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 RPS29P21-201ENST00000496272 170 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 SCARNA8-201ENST00000515924 131 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 RNU6-453P-201ENST00000516819 85 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 SNORA31.17-201ENST00000516953 127 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 AC024995.1-201ENST00000523014 93 ntBASIC1.48□□□□□ -2.17
LRRTM1Q86UE6 AC022254.1-201ENST00000567857 235 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms