Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 RNA5SP125-201ENST00000364843 120 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 RNU6-643P-201ENST00000384018 107 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 MIR15B-201ENST00000385045 98 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 RN7SKP223-201ENST00000410582 62 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 RN7SKP192-201ENST00000411291 327 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 AC245102.2-201ENST00000448956 180 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 RNU7-197P-201ENST00000458836 62 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 RNU6-437P-201ENST00000459408 95 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 RNU7-128P-201ENST00000517247 62 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 AL929325.1-201ENST00000603096 117 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
ZNF549Q6P9A3 ZNF702P-202ENST00000434269 1966 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 RNY1P11-201ENST00000363759 113 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 RNU4-11P-201ENST00000365287 132 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 Y_RNA.343-201ENST00000365354 112 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 RNU6-959P-201ENST00000384671 107 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 RPS4XP11-201ENST00000446897 772 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 SNRPGP8-201ENST00000454064 226 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 RPS27P22-201ENST00000478056 241 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 RPL23AP54-201ENST00000495129 419 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 MIR548X2-201ENST00000579776 100 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 MIR5089-201ENST00000580047 84 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 U6.73-201ENST00000619194 103 ntBASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
ZNF549Q6P9A3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2□□□□□ -2.09
ZNF549Q6P9A3 RNU1-96P-201ENST00000364163 162 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 RNY3P5-201ENST00000384127 102 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 SNORA72-201ENST00000384339 132 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 RNU6-136P-201ENST00000384663 107 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 RN7SKP284-201ENST00000411002 343 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 AC006461.1-201ENST00000412637 326 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 HMGN2P34-201ENST00000437647 269 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 AL121914.1-201ENST00000450188 156 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 RNU6-667P-201ENST00000517186 102 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2□□□□□ -2.09
ZNF549Q6P9A3 MIR5694-201ENST00000581190 76 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 MIR4438-201ENST00000585271 93 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 SNRPGP19-201ENST00000603826 189 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 AL355297.2-201ENST00000604792 129 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2□□□□□ -2.09
ZNF549Q6P9A3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ZNF549Q6P9A3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 SNORD45.3-201ENST00000363836 72 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 SNORD114-6-201ENST00000364393 72 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 RNU6-728P-201ENST00000365375 104 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 SNORA25B-201ENST00000365507 128 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 RNU6-484P-201ENST00000384016 107 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 RNU6-768P-201ENST00000384683 107 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 AL445646.1-201ENST00000431784 216 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 AC011753.1-201ENST00000451001 220 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 RNU7-172P-201ENST00000517125 64 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 U6.108-201ENST00000637764 58 ntBASIC1.99□□□□□ -2.09
ZNF549Q6P9A3 AC100821.1-201ENST00000523153 2479 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 AC010332.2-201ENST00000613083 1904 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 Y_RNA.337-201ENST00000365312 102 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 RNU1-52P-201ENST00000384190 164 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 RNU6-376P-201ENST00000384731 106 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 MIR561-201ENST00000385216 97 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 RNA5SP496-201ENST00000391240 109 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 RNU2-63P-201ENST00000410792 194 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 MTND4LP9-201ENST00000427694 174 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 SNORD11-201ENST00000459124 84 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 CKS1BP2-201ENST00000497342 240 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
ZNF549Q6P9A3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 RNU4-41P-201ENST00000364426 143 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 RNU6-22P-201ENST00000384355 107 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 RNU6-1117P-201ENST00000384525 104 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 AL117342.1-201ENST00000404861 406 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 MIR1262-201ENST00000408276 93 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 AL353689.1-201ENST00000438895 199 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 AC092991.1-201ENST00000477176 376 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 AC011406.1-201ENST00000512440 370 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 SNORA4.4-201ENST00000515921 135 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 RNU1-41P-201ENST00000516161 162 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 SNORA25.12-201ENST00000516202 82 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 RNU1-48P-201ENST00000516400 162 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 AC091178.2-201ENST00000584401 117 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 MIR338-201ENST00000636369 67 ntBASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF549Q6P9A3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms