Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNA5SP272-201ENST00000516095 111 ntBASIC2.55□□□□□ -2
KRT40Q6A162 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.55□□□□□ -2
KRT40Q6A162 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.55□□□□□ -2
KRT40Q6A162 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.55□□□□□ -2
KRT40Q6A162 MIR3616-201ENST00000584070 92 ntBASIC2.55□□□□□ -2
KRT40Q6A162 U6.73-201ENST00000619194 103 ntBASIC2.55□□□□□ -2
KRT40Q6A162 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
KRT40Q6A162 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRT40Q6A162 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRT40Q6A162 Y_RNA.568-201ENST00000384742 113 ntBASIC2.54□□□□□ -2
KRT40Q6A162 MIR15B-201ENST00000385045 98 ntBASIC2.54□□□□□ -2
KRT40Q6A162 RNU6-1228P-201ENST00000391014 107 ntBASIC2.54□□□□□ -2
KRT40Q6A162 MIR1262-201ENST00000408276 93 ntBASIC2.54□□□□□ -2
KRT40Q6A162 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.54□□□□□ -2
KRT40Q6A162 AL445687.1-201ENST00000439946 251 ntBASIC2.54□□□□□ -2
KRT40Q6A162 AC245102.2-201ENST00000448956 180 ntBASIC2.54□□□□□ -2
KRT40Q6A162 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.54□□□□□ -2
KRT40Q6A162 RNU6-426P-201ENST00000516464 97 ntBASIC2.54□□□□□ -2
KRT40Q6A162 RNU7-172P-201ENST00000517125 64 ntBASIC2.54□□□□□ -2
KRT40Q6A162 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
KRT40Q6A162 AP000942.3-201ENST00000603702 160 ntBASIC2.54□□□□□ -2
KRT40Q6A162 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRT40Q6A162 RNU1-96P-201ENST00000364163 162 ntBASIC2.53□□□□□ -2
KRT40Q6A162 RNU6-643P-201ENST00000384018 107 ntBASIC2.53□□□□□ -2
KRT40Q6A162 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
KRT40Q6A162 MIR548I2-201ENST00000408348 149 ntBASIC2.53□□□□□ -2
KRT40Q6A162 AL121914.1-201ENST00000450188 156 ntBASIC2.53□□□□□ -2
KRT40Q6A162 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.53□□□□□ -2
KRT40Q6A162 AC107027.2-201ENST00000512197 115 ntBASIC2.53□□□□□ -2
KRT40Q6A162 AC011406.1-201ENST00000512440 370 ntBASIC2.53□□□□□ -2
KRT40Q6A162 RNA5SP445-201ENST00000515889 115 ntBASIC2.53□□□□□ -2
KRT40Q6A162 SNORA4.4-201ENST00000515921 135 ntBASIC2.53□□□□□ -2
KRT40Q6A162 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.53□□□□□ -2
KRT40Q6A162 NDUFA5P6-201ENST00000542110 379 ntBASIC2.53□□□□□ -2
KRT40Q6A162 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.53□□□□□ -2
KRT40Q6A162 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.53□□□□□ -2
KRT40Q6A162 MIRLET7G-201ENST00000362280 84 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 snoU2-30.2-201ENST00000362805 70 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 SNORA33-201ENST00000363664 130 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 SNORA72-201ENST00000384339 132 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 Y_RNA.488-201ENST00000384403 102 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 RNU6-417P-201ENST00000384712 107 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 AC006461.1-201ENST00000412637 326 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.52□□□□□ -2.01
KRT40Q6A162 RNU1-104P-201ENST00000517280 175 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 AP001485.1-201ENST00000604799 199 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 U6.108-201ENST00000637764 58 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 ZNF702P-202ENST00000434269 1966 ntBASIC2.52□□□□□ -2.01
KRT40Q6A162 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRT40Q6A162 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRT40Q6A162 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.51□□□□□ -2.01
KRT40Q6A162 RNU4-13P-201ENST00000364019 141 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 SNORA67.1-201ENST00000364749 141 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 RNU4-11P-201ENST00000365287 132 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 Y_RNA.466-201ENST00000384294 113 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 AL023284.1-201ENST00000403956 276 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 RNU4-43P-201ENST00000410628 137 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 Y_RNA.622-201ENST00000411091 108 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 SRIP3-201ENST00000413200 219 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 AL353689.1-201ENST00000438895 199 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 SNRPGP8-201ENST00000454064 226 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 RNA5SP200-201ENST00000516360 103 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.51□□□□□ -2.01
KRT40Q6A162 MIR5002-201ENST00000584713 97 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 DNAJC19P2-201ENST00000593340 302 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 MIR338-201ENST00000636369 67 ntBASIC2.51□□□□□ -2.01
KRT40Q6A162 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRT40Q6A162 RNU1-17P-201ENST00000363022 152 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 Y_RNA.99-201ENST00000363138 105 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 RNY1P11-201ENST00000363759 113 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 SNORD45.3-201ENST00000363836 72 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 RNU4-41P-201ENST00000364426 143 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 Y_RNA.497-201ENST00000384447 98 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 Y_RNA.508-201ENST00000384502 114 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 RNU6-1072P-201ENST00000384703 107 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 RNU6-443P-201ENST00000384780 107 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 RNA5SP467-201ENST00000391274 118 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 AL117342.1-201ENST00000404861 406 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 CYCSP49-201ENST00000420810 319 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 RPL23AP42-201ENST00000471152 471 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 RNU6-1041P-201ENST00000516254 102 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 SNORA31.11-201ENST00000516528 139 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.5□□□□□ -2.01
KRT40Q6A162 MIR4781-201ENST00000585250 76 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 AC073413.2-201ENST00000604332 360 ntBASIC2.5□□□□□ -2.01
KRT40Q6A162 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.5□□□□□ -2.01
KRT40Q6A162 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
KRT40Q6A162 RNU6-728P-201ENST00000365375 104 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 RNU6-484P-201ENST00000384016 107 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 RNY3P5-201ENST00000384127 102 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 RNU6-376P-201ENST00000384731 106 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 Y_RNA.586-201ENST00000391146 98 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 MIR1253-201ENST00000408273 105 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 RNU6-257P-201ENST00000410238 98 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 AC010154.1-201ENST00000425857 269 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 AC108729.3-201ENST00000513484 108 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 SCARNA16.3-201ENST00000516595 184 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 AC091178.2-201ENST00000584401 117 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 AL353149.1-201ENST00000610667 244 ntBASIC2.49□□□□□ -2.01
KRT40Q6A162 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 242.7 ms