Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 Y_RNA.191-201ENST00000363972 113 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 Y_RNA.329-201ENST00000365209 107 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 Y_RNA.496-201ENST00000384444 101 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 AC002429.1-201ENST00000437672 148 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.78□□□□□ -2.28
HMGCS1Q01581 RPS26P48-201ENST00000491713 339 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 CYCTP-201ENST00000504253 315 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 SNORA31.4-201ENST00000516049 129 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 SNORD79.1-201ENST00000516069 84 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 RNU6-875P-201ENST00000516488 106 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 RNU6-911P-201ENST00000516523 104 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
HMGCS1Q01581 MIR4452-201ENST00000583004 71 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 VN1R91P-201ENST00000594377 169 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 AC022441.3-201ENST00000605737 136 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 MIR4272-201ENST00000635924 64 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HMGCS1Q01581 MIR520E-201ENST00000384867 87 ntBASIC0.77□□□□□ -2.29
HMGCS1Q01581 MIR1298-201ENST00000408783 112 ntBASIC0.77□□□□□ -2.29
HMGCS1Q01581 MLLT10P1-201ENST00000418346 262 ntBASIC0.77□□□□□ -2.29
HMGCS1Q01581 RNU6-507P-201ENST00000516045 100 ntBASIC0.77□□□□□ -2.29
HMGCS1Q01581 AC093027.1-201ENST00000546698 429 ntBASIC0.77□□□□□ -2.29
HMGCS1Q01581 AL357312.1-201ENST00000603879 298 ntBASIC0.77□□□□□ -2.29
HMGCS1Q01581 AC027279.3-201ENST00000625055 122 ntBASIC0.77□□□□□ -2.29
HMGCS1Q01581 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
HMGCS1Q01581 Y_RNA.187-201ENST00000363918 113 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 Y_RNA.230-201ENST00000364348 109 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 RNU6-1175P-201ENST00000365200 107 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 Y_RNA.428-201ENST00000384078 102 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 Y_RNA.529-201ENST00000384586 119 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 MIR19B1-201ENST00000384829 87 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 RPS20P10-201ENST00000451209 253 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 LINC01399-202ENST00000458450 244 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 SNORD124-201ENST00000459577 104 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 FGF7P4-201ENST00000509595 295 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 SNORD116.3-201ENST00000517176 78 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 MIR3192-201ENST00000584920 77 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 MIR4762-201ENST00000585261 75 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 AC005972.2-201ENST00000604690 348 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 AC091925.1-201ENST00000623204 462 ntBASIC0.76□□□□□ -2.29
HMGCS1Q01581 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
HMGCS1Q01581 RNU6-1115P-201ENST00000362490 106 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 Y_RNA.58-201ENST00000362807 102 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 Y_RNA.80-201ENST00000362996 102 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 Y_RNA.154-201ENST00000363624 102 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 U8.5-201ENST00000364528 136 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 Y_RNA.253-201ENST00000364562 112 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 RNY3P1-201ENST00000365085 102 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 Y_RNA.336-201ENST00000365307 109 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 RNY3-201ENST00000365484 102 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 Y_RNA.485-201ENST00000384395 102 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 Y_RNA.570-201ENST00000384750 101 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 RNU6-1105P-201ENST00000384774 107 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 MIR522-201ENST00000385071 87 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 MIR516B2-201ENST00000385190 85 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 MCFD2P1-201ENST00000417812 300 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 AC063976.4-201ENST00000421971 163 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGCS1Q01581 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGCS1Q01581 RPL39P39-201ENST00000455840 151 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 RNU7-152P-201ENST00000458982 64 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 SNORD19B-201ENST00000459623 84 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.75□□□□□ -2.29
HMGCS1Q01581 RN7SKP295-201ENST00000517264 153 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 AC092447.9-201ENST00000603395 144 ntBASIC0.75□□□□□ -2.29
HMGCS1Q01581 SNORD81.1-201ENST00000363064 77 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 Y_RNA.226-201ENST00000364337 114 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 Y_RNA.356-201ENST00000365475 113 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 RNU6-969P-201ENST00000383900 105 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 AL390729.2-201ENST00000416137 156 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 MTCO2P27-201ENST00000420740 428 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 MTND1P14-201ENST00000427400 950 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 Y_RNA.661-201ENST00000516003 99 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 SNORD111.1-201ENST00000516421 86 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 RNU4-77P-201ENST00000516692 156 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 MIR5188-201ENST00000583467 113 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 PRELID3BP2-201ENST00000605362 201 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 AC112487.2-201ENST00000637950 304 ntBASIC0.74□□□□□ -2.29
HMGCS1Q01581 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
HMGCS1Q01581 AC008163.1-202ENST00000636004 2889 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 Y_RNA.5-201ENST00000362334 102 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 Y_RNA.458-201ENST00000384240 102 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 MIR452-201ENST00000385020 85 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 SNORD12-201ENST00000391002 90 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 SNORA75.2-201ENST00000391138 150 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 SNORA75.3-201ENST00000391231 150 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 AL590004.1-201ENST00000405321 300 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 RNU6-855P-201ENST00000410395 104 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 AF228730.4-201ENST00000421457 183 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGCS1Q01581 SNORD45.4-201ENST00000516629 73 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 AC090142.3-201ENST00000519012 385 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 MIR4423-201ENST00000580922 80 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 DEFB117-201ENST00000602356 141 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms