Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPS12P2-201ENST00000439728 269 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 AL606517.2-201ENST00000442855 241 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 AL138752.1-201ENST00000452964 351 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 RPL23AP63-201ENST00000498752 471 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX6-1P78426 Y_RNA.700-201ENST00000516806 100 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-1P78426 AC100767.1-201ENST00000528178 123 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX6-1P78426 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.13□□□□□ -2.07
NKX6-1P78426 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 MIR6895-201ENST00000613497 78 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 JPX_2.1-201ENST00000614161 69 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX6-1P78426 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NKX6-1P78426 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NKX6-1P78426 MIR411-201ENST00000362239 96 ntBASIC2.12□□□□□ -2.07
NKX6-1P78426 Y_RNA.297-201ENST00000364950 91 ntBASIC2.12□□□□□ -2.07
NKX6-1P78426 MIR626-201ENST00000385032 94 ntBASIC2.12□□□□□ -2.07
NKX6-1P78426 RNA5SP482-201ENST00000391269 118 ntBASIC2.12□□□□□ -2.07
NKX6-1P78426 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NKX6-1P78426 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-1P78426 RNU6-1007P-201ENST00000516586 107 ntBASIC2.12□□□□□ -2.07
NKX6-1P78426 AC021269.2-201ENST00000532318 330 ntBASIC2.12□□□□□ -2.07
NKX6-1P78426 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
NKX6-1P78426 AC016717.2-201ENST00000609089 5141 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
NKX6-1P78426 Y_RNA.24-201ENST00000362508 103 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 RNU6-653P-201ENST00000363074 106 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 RNU4-10P-201ENST00000364383 140 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 RNU4-17P-201ENST00000365598 141 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 MIR764-201ENST00000390811 85 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 RNA5SP496-201ENST00000391240 109 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 AL034345.1-201ENST00000407768 123 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 RNA5SP247-201ENST00000411181 105 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 HSPE1P9-201ENST00000440046 311 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 RPL23AP6-201ENST00000446637 472 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 HMGN1P7-201ENST00000491722 313 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 AC234781.5-201ENST00000508429 271 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 RNU6-138P-201ENST00000515952 107 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 RNU6-548P-201ENST00000517083 115 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 MIR1273D-201ENST00000577266 86 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX6-1P78426 AL773524.1-201ENST00000614065 229 ntBASIC2.11□□□□□ -2.07
NKX6-1P78426 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.11□□□□□ -2.07
NKX6-1P78426 RNU6-969P-201ENST00000383900 105 ntBASIC2.1□□□□□ -2.07
NKX6-1P78426 RNU6-383P-201ENST00000410864 94 ntBASIC2.1□□□□□ -2.07
NKX6-1P78426 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.1□□□□□ -2.07
NKX6-1P78426 FTH1P12-201ENST00000432137 551 ntBASIC2.1□□□□□ -2.07
NKX6-1P78426 snoU13.27-201ENST00000459278 104 ntBASIC2.1□□□□□ -2.07
NKX6-1P78426 SNORA31.17-201ENST00000516953 127 ntBASIC2.1□□□□□ -2.07
NKX6-1P78426 RNA5SP437-201ENST00000517249 129 ntBASIC2.1□□□□□ -2.07
NKX6-1P78426 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.1□□□□□ -2.07
NKX6-1P78426 MIR4709-201ENST00000577272 72 ntBASIC2.1□□□□□ -2.07
NKX6-1P78426 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
NKX6-1P78426 RNU6-1020P-201ENST00000363684 107 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 Y_RNA.238-201ENST00000364441 102 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 Y_RNA.274-201ENST00000364714 101 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 RNU6-360P-201ENST00000390944 104 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 Y_RNA.793-201ENST00000411222 111 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 AC009310.1-201ENST00000414414 451 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 AC244636.1-201ENST00000421152 228 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 STAG3L5P-204ENST00000443759 179 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 RNU7-34P-201ENST00000459394 64 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 RN7SKP164-201ENST00000516138 266 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 RNY3P16-201ENST00000516338 101 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 RPL23AP91-201ENST00000569211 455 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 AC103810.6-201ENST00000606708 136 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 MIR1291-201ENST00000627649 87 ntBASIC2.09□□□□□ -2.07
NKX6-1P78426 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.09□□□□□ -2.08
NKX6-1P78426 AC005336.3-201ENST00000623833 2679 ntBASIC2.09□□□□□ -2.08
NKX6-1P78426 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
NKX6-1P78426 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NKX6-1P78426 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
NKX6-1P78426 MIR126-201ENST00000362291 85 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 Y_RNA.29-201ENST00000362570 113 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 SNORD114-1-201ENST00000362705 72 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 SNORD68-201ENST00000363214 84 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 RNA5SP99-201ENST00000364020 114 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 Y_RNA.253-201ENST00000364562 112 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 RNU6-923P-201ENST00000364753 107 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 SNORA4.2-201ENST00000365313 147 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 RNU6-493P-201ENST00000391321 108 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 MLLT10P1-201ENST00000418346 262 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 SNRPGP10-201ENST00000432323 225 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 MTND5P15-201ENST00000434246 349 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 Y_RNA.644-201ENST00000459006 113 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.08□□□□□ -2.08
NKX6-1P78426 Y_RNA.674-201ENST00000516362 113 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 SNORA31.10-201ENST00000516482 106 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 RNA5SP281-201ENST00000516504 135 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 AL591926.4-201ENST00000616895 298 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 MIR6873-201ENST00000622788 63 ntBASIC2.08□□□□□ -2.08
NKX6-1P78426 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NKX6-1P78426 AC068700.1-201ENST00000565862 3754 ntBASIC2.07□□□□□ -2.08
NKX6-1P78426 RNU6-1209P-201ENST00000363655 107 ntBASIC2.07□□□□□ -2.08
NKX6-1P78426 Y_RNA.785-201ENST00000384290 109 ntBASIC2.07□□□□□ -2.08
NKX6-1P78426 AL603825.1-201ENST00000438481 80 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 238.4 ms