Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RPS15AP28-201ENST00000435088 386 ntBASIC2.75□□□□□ -1.97
YBX1P67809 Z96811.1-201ENST00000445880 108 ntBASIC2.75□□□□□ -1.97
YBX1P67809 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.75□□□□□ -1.97
YBX1P67809 AC093259.1-201ENST00000509755 300 ntBASIC2.75□□□□□ -1.97
YBX1P67809 RNA5SP356-201ENST00000515972 94 ntBASIC2.75□□□□□ -1.97
YBX1P67809 RN7SKP282-201ENST00000516824 299 ntBASIC2.75□□□□□ -1.97
YBX1P67809 RNU6-856P-201ENST00000516959 98 ntBASIC2.75□□□□□ -1.97
YBX1P67809 IGKV1-22-201ENST00000524313 326 ntBASIC2.75□□□□□ -1.97
YBX1P67809 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
YBX1P67809 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.75□□□□□ -1.97
YBX1P67809 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
YBX1P67809 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
YBX1P67809 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.74□□□□□ -1.97
YBX1P67809 AL161431.1-201ENST00000618966 4205 ntBASIC2.74□□□□□ -1.97
YBX1P67809 RNU1-23P-201ENST00000363361 144 ntBASIC2.74□□□□□ -1.97
YBX1P67809 SNORA9.2-201ENST00000365361 133 ntBASIC2.74□□□□□ -1.97
YBX1P67809 Y_RNA.528-201ENST00000384575 108 ntBASIC2.74□□□□□ -1.97
YBX1P67809 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.74□□□□□ -1.97
YBX1P67809 CYP2C59P-201ENST00000457790 269 ntBASIC2.74□□□□□ -1.97
YBX1P67809 AC091826.1-201ENST00000514065 313 ntBASIC2.74□□□□□ -1.97
YBX1P67809 RNU6-1146P-201ENST00000516282 102 ntBASIC2.74□□□□□ -1.97
YBX1P67809 RNU6-1291P-201ENST00000516591 104 ntBASIC2.74□□□□□ -1.97
YBX1P67809 RNU6-537P-201ENST00000517277 103 ntBASIC2.74□□□□□ -1.97
YBX1P67809 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.74□□□□□ -1.97
YBX1P67809 MIR5582-201ENST00000579697 68 ntBASIC2.74□□□□□ -1.97
YBX1P67809 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
YBX1P67809 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
YBX1P67809 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
YBX1P67809 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
YBX1P67809 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.74□□□□□ -1.97
YBX1P67809 Y_RNA.332-201ENST00000365271 113 ntBASIC2.73□□□□□ -1.97
YBX1P67809 RNU6-1292P-201ENST00000383856 107 ntBASIC2.73□□□□□ -1.97
YBX1P67809 SNORD72-201ENST00000390994 80 ntBASIC2.73□□□□□ -1.97
YBX1P67809 AC104332.2-201ENST00000429959 156 ntBASIC2.73□□□□□ -1.97
YBX1P67809 RN7SL297P-201ENST00000483161 293 ntBASIC2.73□□□□□ -1.97
YBX1P67809 RPS29P24-201ENST00000486345 171 ntBASIC2.73□□□□□ -1.97
YBX1P67809 RNU6-412P-201ENST00000516434 106 ntBASIC2.73□□□□□ -1.97
YBX1P67809 ELOCP29-201ENST00000588193 334 ntBASIC2.73□□□□□ -1.97
YBX1P67809 AC022217.4-201ENST00000604389 163 ntBASIC2.73□□□□□ -1.97
YBX1P67809 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.73□□□□□ -1.97
YBX1P67809 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.73□□□□□ -1.97
YBX1P67809 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.73□□□□□ -1.97
YBX1P67809 RNU1-96P-201ENST00000364163 162 ntBASIC2.72□□□□□ -1.97
YBX1P67809 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
YBX1P67809 Y_RNA.253-201ENST00000364562 112 ntBASIC2.72□□□□□ -1.97
YBX1P67809 Y_RNA.267-201ENST00000364679 109 ntBASIC2.72□□□□□ -1.97
YBX1P67809 RNA5SP125-201ENST00000364843 120 ntBASIC2.72□□□□□ -1.97
YBX1P67809 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
YBX1P67809 RNY4P30-201ENST00000410216 95 ntBASIC2.72□□□□□ -1.97
YBX1P67809 RNA5SP344-201ENST00000411081 104 ntBASIC2.72□□□□□ -1.97
YBX1P67809 AC007064.1-201ENST00000412238 351 ntBASIC2.72□□□□□ -1.97
YBX1P67809 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.72□□□□□ -1.97
YBX1P67809 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.72□□□□□ -1.97
YBX1P67809 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.72□□□□□ -1.97
YBX1P67809 AC003982.1-202ENST00000469928 248 ntBASIC2.72□□□□□ -1.97
YBX1P67809 AC011406.1-201ENST00000512440 370 ntBASIC2.72□□□□□ -1.97
YBX1P67809 RNU6-693P-201ENST00000516134 107 ntBASIC2.72□□□□□ -1.97
YBX1P67809 RNA5SP236-201ENST00000516169 116 ntBASIC2.72□□□□□ -1.97
YBX1P67809 Y_RNA.666-201ENST00000516187 112 ntBASIC2.72□□□□□ -1.97
YBX1P67809 RNU7-99P-201ENST00000516271 62 ntBASIC2.72□□□□□ -1.97
YBX1P67809 Y_RNA.677-201ENST00000516401 85 ntBASIC2.72□□□□□ -1.97
YBX1P67809 AC007229.1-201ENST00000590455 412 ntBASIC2.72□□□□□ -1.97
YBX1P67809 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
YBX1P67809 SNORD24-201ENST00000383884 75 ntBASIC2.71□□□□□ -1.98
YBX1P67809 MIR512-1-201ENST00000384913 84 ntBASIC2.71□□□□□ -1.98
YBX1P67809 RNU11-5P-201ENST00000391216 129 ntBASIC2.71□□□□□ -1.98
YBX1P67809 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.71□□□□□ -1.98
YBX1P67809 RNU6-1149P-201ENST00000516810 97 ntBASIC2.71□□□□□ -1.98
YBX1P67809 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
YBX1P67809 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.71□□□□□ -1.98
YBX1P67809 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
YBX1P67809 MIR340-201ENST00000362125 95 ntBASIC2.7□□□□□ -1.98
YBX1P67809 MIR126-201ENST00000362291 85 ntBASIC2.7□□□□□ -1.98
YBX1P67809 RNU4-82P-201ENST00000362443 140 ntBASIC2.7□□□□□ -1.98
YBX1P67809 snoU2-30.2-201ENST00000362805 70 ntBASIC2.7□□□□□ -1.98
YBX1P67809 RNU6-888P-201ENST00000363010 101 ntBASIC2.7□□□□□ -1.98
YBX1P67809 RNU6-106P-201ENST00000384405 107 ntBASIC2.7□□□□□ -1.98
YBX1P67809 RNA5SP467-201ENST00000391274 118 ntBASIC2.7□□□□□ -1.98
YBX1P67809 GTF3AP2-201ENST00000557014 266 ntBASIC2.7□□□□□ -1.98
YBX1P67809 AC007012.1-201ENST00000567192 175 ntBASIC2.7□□□□□ -1.98
YBX1P67809 AC008507.4-201ENST00000585464 127 ntBASIC2.7□□□□□ -1.98
YBX1P67809 AC106754.2-201ENST00000623006 233 ntBASIC2.7□□□□□ -1.98
YBX1P67809 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
YBX1P67809 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.69□□□□□ -1.98
YBX1P67809 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
YBX1P67809 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
YBX1P67809 AC108206.1-201ENST00000570186 4159 ntBASIC2.69□□□□□ -1.98
YBX1P67809 RNU6-1107P-201ENST00000364817 104 ntBASIC2.69□□□□□ -1.98
YBX1P67809 RNU6-851P-201ENST00000384565 107 ntBASIC2.69□□□□□ -1.98
YBX1P67809 SNORD88.1-201ENST00000408684 91 ntBASIC2.69□□□□□ -1.98
YBX1P67809 RNA5SP136-201ENST00000410906 107 ntBASIC2.69□□□□□ -1.98
YBX1P67809 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.69□□□□□ -1.98
YBX1P67809 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.69□□□□□ -1.98
YBX1P67809 CALM2P4-201ENST00000430810 426 ntBASIC2.69□□□□□ -1.98
YBX1P67809 SNRPGP13-201ENST00000442212 177 ntBASIC2.69□□□□□ -1.98
YBX1P67809 AC023141.11-201ENST00000508864 202 ntBASIC2.69□□□□□ -1.98
YBX1P67809 RNU6-1041P-201ENST00000516254 102 ntBASIC2.69□□□□□ -1.98
YBX1P67809 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.69□□□□□ -1.98
YBX1P67809 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.69□□□□□ -1.98
YBX1P67809 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms