Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AC007064.1-201ENST00000412238 351 ntBASIC2.4□□□□□ -2.03
PTX3P26022 AC245047.3-201ENST00000429428 127 ntBASIC2.4□□□□□ -2.03
PTX3P26022 SNRPGP8-201ENST00000454064 226 ntBASIC2.4□□□□□ -2.03
PTX3P26022 RNA5SP356-201ENST00000515972 94 ntBASIC2.4□□□□□ -2.03
PTX3P26022 RNU6-561P-201ENST00000516222 102 ntBASIC2.4□□□□□ -2.03
PTX3P26022 RNU7-28P-201ENST00000516759 62 ntBASIC2.4□□□□□ -2.03
PTX3P26022 MIR5094-201ENST00000578766 85 ntBASIC2.4□□□□□ -2.03
PTX3P26022 MIR6895-201ENST00000613497 78 ntBASIC2.4□□□□□ -2.03
PTX3P26022 CTSLP2-204ENST00000629029 392 ntBASIC2.4□□□□□ -2.03
PTX3P26022 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
PTX3P26022 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PTX3P26022 AC062016.1-201ENST00000355719 319 ntBASIC2.39□□□□□ -2.03
PTX3P26022 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
PTX3P26022 RNU6-1138P-201ENST00000365359 106 ntBASIC2.39□□□□□ -2.03
PTX3P26022 SNORD116-18-201ENST00000383961 92 ntBASIC2.39□□□□□ -2.03
PTX3P26022 Y_RNA.432-201ENST00000384087 111 ntBASIC2.39□□□□□ -2.03
PTX3P26022 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PTX3P26022 RNU4-61P-201ENST00000411243 107 ntBASIC2.39□□□□□ -2.03
PTX3P26022 SNRPGP10-201ENST00000432323 225 ntBASIC2.39□□□□□ -2.03
PTX3P26022 RPS27P1-201ENST00000450552 247 ntBASIC2.39□□□□□ -2.03
PTX3P26022 AC011753.1-201ENST00000451001 220 ntBASIC2.39□□□□□ -2.03
PTX3P26022 OR9P1P-201ENST00000496431 281 ntBASIC2.39□□□□□ -2.03
PTX3P26022 RNU6-1299P-201ENST00000516316 100 ntBASIC2.39□□□□□ -2.03
PTX3P26022 RNA5SP153-201ENST00000516498 76 ntBASIC2.39□□□□□ -2.03
PTX3P26022 MTND5P41-201ENST00000517498 206 ntBASIC2.39□□□□□ -2.03
PTX3P26022 AC121758.2-201ENST00000553271 193 ntBASIC2.39□□□□□ -2.03
PTX3P26022 MIR4319-201ENST00000577285 85 ntBASIC2.39□□□□□ -2.03
PTX3P26022 U1.36-201ENST00000620684 176 ntBASIC2.39□□□□□ -2.03
PTX3P26022 U4.3-201ENST00000621047 82 ntBASIC2.39□□□□□ -2.03
PTX3P26022 AC245060.5-201ENST00000610778 3293 ntBASIC2.39□□□□□ -2.03
PTX3P26022 AL365361.1-201ENST00000566942 3481 ntBASIC2.38□□□□□ -2.03
PTX3P26022 RNU6-774P-201ENST00000363238 107 ntBASIC2.38□□□□□ -2.03
PTX3P26022 SNORA5B-201ENST00000363786 132 ntBASIC2.38□□□□□ -2.03
PTX3P26022 RNU6-950P-201ENST00000384651 107 ntBASIC2.38□□□□□ -2.03
PTX3P26022 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PTX3P26022 RNA5SP482-201ENST00000391269 118 ntBASIC2.38□□□□□ -2.03
PTX3P26022 SNORA26-201ENST00000391286 122 ntBASIC2.38□□□□□ -2.03
PTX3P26022 Y_RNA.622-201ENST00000411091 108 ntBASIC2.38□□□□□ -2.03
PTX3P26022 AC006461.1-201ENST00000412637 326 ntBASIC2.38□□□□□ -2.03
PTX3P26022 AC245047.4-201ENST00000433189 144 ntBASIC2.38□□□□□ -2.03
PTX3P26022 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.38□□□□□ -2.03
PTX3P26022 RNU6-197P-201ENST00000516680 100 ntBASIC2.38□□□□□ -2.03
PTX3P26022 MIR4529-201ENST00000578110 78 ntBASIC2.38□□□□□ -2.03
PTX3P26022 ZNF658B-202ENST00000615961 3375 ntBASIC2.38□□□□□ -2.03
PTX3P26022 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.38□□□□□ -2.03
PTX3P26022 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.38□□□□□ -2.03
PTX3P26022 RNU6-1130P-201ENST00000365434 107 ntBASIC2.37□□□□□ -2.03
PTX3P26022 RNU6-484P-201ENST00000384016 107 ntBASIC2.37□□□□□ -2.03
PTX3P26022 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.37□□□□□ -2.03
PTX3P26022 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
PTX3P26022 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.37□□□□□ -2.03
PTX3P26022 DNAJC19P2-201ENST00000593340 302 ntBASIC2.37□□□□□ -2.03
PTX3P26022 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
PTX3P26022 AL591926.4-201ENST00000616895 298 ntBASIC2.37□□□□□ -2.03
PTX3P26022 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.37□□□□□ -2.03
PTX3P26022 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PTX3P26022 MIR126-201ENST00000362291 85 ntBASIC2.36□□□□□ -2.03
PTX3P26022 RNA5SP68-201ENST00000363885 119 ntBASIC2.36□□□□□ -2.03
PTX3P26022 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
PTX3P26022 SNORA63D-201ENST00000364359 132 ntBASIC2.36□□□□□ -2.03
PTX3P26022 SNORD50.2-201ENST00000365465 70 ntBASIC2.36□□□□□ -2.03
PTX3P26022 Y_RNA.400-201ENST00000383963 111 ntBASIC2.36□□□□□ -2.03
PTX3P26022 FTH1P12-201ENST00000432137 551 ntBASIC2.36□□□□□ -2.03
PTX3P26022 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.36□□□□□ -2.03
PTX3P26022 MIR4762-201ENST00000585261 75 ntBASIC2.36□□□□□ -2.03
PTX3P26022 AC078899.2-201ENST00000595282 212 ntBASIC2.36□□□□□ -2.03
PTX3P26022 AC097639.2-201ENST00000603159 172 ntBASIC2.36□□□□□ -2.03
PTX3P26022 AC245884.12-201ENST00000615364 59 ntBASIC2.36□□□□□ -2.03
PTX3P26022 Y_RNA.778-201ENST00000620203 90 ntBASIC2.36□□□□□ -2.03
PTX3P26022 MIR203B-201ENST00000636080 86 ntBASIC2.36□□□□□ -2.03
PTX3P26022 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PTX3P26022 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PTX3P26022 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PTX3P26022 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.35□□□□□ -2.03
PTX3P26022 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTX3P26022 MIR522-201ENST00000385071 87 ntBASIC2.35□□□□□ -2.03
PTX3P26022 RNA5SP109-201ENST00000391010 116 ntBASIC2.35□□□□□ -2.03
PTX3P26022 RNU6-131P-201ENST00000391144 107 ntBASIC2.35□□□□□ -2.03
PTX3P26022 AL606517.2-201ENST00000442855 241 ntBASIC2.35□□□□□ -2.03
PTX3P26022 AC108938.1-201ENST00000451204 136 ntBASIC2.35□□□□□ -2.03
PTX3P26022 NDUFA4P2-201ENST00000489989 244 ntBASIC2.35□□□□□ -2.03
PTX3P26022 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
PTX3P26022 RNVU1-2-201ENST00000516326 135 ntBASIC2.35□□□□□ -2.03
PTX3P26022 RNU7-149P-201ENST00000516739 59 ntBASIC2.35□□□□□ -2.03
PTX3P26022 RNU6-789P-201ENST00000517105 102 ntBASIC2.35□□□□□ -2.03
PTX3P26022 SUB1P4-201ENST00000566062 339 ntBASIC2.35□□□□□ -2.03
PTX3P26022 MIR3646-201ENST00000578301 84 ntBASIC2.35□□□□□ -2.03
PTX3P26022 SNORA28-201ENST00000606769 126 ntBASIC2.35□□□□□ -2.03
PTX3P26022 Pinc.1-201ENST00000616452 154 ntBASIC2.35□□□□□ -2.03
PTX3P26022 MIR8054-201ENST00000620877 86 ntBASIC2.35□□□□□ -2.03
PTX3P26022 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PTX3P26022 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTX3P26022 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
PTX3P26022 U8.5-201ENST00000364528 136 ntBASIC2.34□□□□□ -2.03
PTX3P26022 Y_RNA.265-201ENST00000364677 108 ntBASIC2.34□□□□□ -2.03
PTX3P26022 MIR520A-201ENST00000384862 85 ntBASIC2.34□□□□□ -2.03
PTX3P26022 MIR524-201ENST00000385242 87 ntBASIC2.34□□□□□ -2.03
PTX3P26022 RNU6-440P-201ENST00000390882 105 ntBASIC2.34□□□□□ -2.03
PTX3P26022 AL359511.1-201ENST00000402970 211 ntBASIC2.34□□□□□ -2.03
PTX3P26022 NDUFB4P4-201ENST00000404822 243 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms