Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RNU6-443P-201ENST00000384780 107 ntBASIC4.52□□□□□ -1.69
CHGAP10645 RNA5SP482-201ENST00000391269 118 ntBASIC4.52□□□□□ -1.69
CHGAP10645 SNORD45.4-201ENST00000516629 73 ntBASIC4.52□□□□□ -1.69
CHGAP10645 RNU7-28P-201ENST00000516759 62 ntBASIC4.52□□□□□ -1.69
CHGAP10645 MIR2276-201ENST00000516886 89 ntBASIC4.52□□□□□ -1.69
CHGAP10645 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHGAP10645 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CHGAP10645 Y_RNA.298-201ENST00000364960 107 ntBASIC4.51□□□□□ -1.69
CHGAP10645 RNU6-294P-201ENST00000364999 102 ntBASIC4.51□□□□□ -1.69
CHGAP10645 SNORA48.8-201ENST00000391324 134 ntBASIC4.51□□□□□ -1.69
CHGAP10645 RPL21P3-201ENST00000395517 478 ntBASIC4.51□□□□□ -1.69
CHGAP10645 RN7SKP220-201ENST00000410611 288 ntBASIC4.51□□□□□ -1.69
CHGAP10645 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.51□□□□□ -1.69
CHGAP10645 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.51□□□□□ -1.69
CHGAP10645 RNA5SP356-201ENST00000515972 94 ntBASIC4.51□□□□□ -1.69
CHGAP10645 GTF3AP2-201ENST00000557014 266 ntBASIC4.51□□□□□ -1.69
CHGAP10645 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHGAP10645 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHGAP10645 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHGAP10645 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHGAP10645 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHGAP10645 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.5□□□□□ -1.69
CHGAP10645 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHGAP10645 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.5□□□□□ -1.69
CHGAP10645 SNORD73B-201ENST00000364394 72 ntBASIC4.5□□□□□ -1.69
CHGAP10645 Y_RNA.440-201ENST00000384120 114 ntBASIC4.5□□□□□ -1.69
CHGAP10645 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CHGAP10645 U8.17-201ENST00000391292 132 ntBASIC4.5□□□□□ -1.69
CHGAP10645 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.5□□□□□ -1.69
CHGAP10645 AC087499.4-201ENST00000448505 178 ntBASIC4.5□□□□□ -1.69
CHGAP10645 RN7SL297P-201ENST00000483161 293 ntBASIC4.5□□□□□ -1.69
CHGAP10645 AC091826.1-201ENST00000514065 313 ntBASIC4.5□□□□□ -1.69
CHGAP10645 RNU6-970P-201ENST00000516312 107 ntBASIC4.5□□□□□ -1.69
CHGAP10645 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.5□□□□□ -1.69
CHGAP10645 MIR5009-201ENST00000578736 100 ntBASIC4.5□□□□□ -1.69
CHGAP10645 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CHGAP10645 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHGAP10645 RNU6-862P-201ENST00000362804 105 ntBASIC4.49□□□□□ -1.69
CHGAP10645 TRIAP1P1-201ENST00000427062 225 ntBASIC4.49□□□□□ -1.69
CHGAP10645 RNU7-80P-201ENST00000459562 61 ntBASIC4.49□□□□□ -1.69
CHGAP10645 SNORD36C-201ENST00000516733 66 ntBASIC4.49□□□□□ -1.69
CHGAP10645 AC068339.1-201ENST00000526965 141 ntBASIC4.49□□□□□ -1.69
CHGAP10645 MIR4778-201ENST00000577635 80 ntBASIC4.49□□□□□ -1.69
CHGAP10645 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHGAP10645 MIR22-201ENST00000362190 85 ntBASIC4.48□□□□□ -1.69
CHGAP10645 SNORA80E-201ENST00000384744 137 ntBASIC4.48□□□□□ -1.69
CHGAP10645 MIR1262-201ENST00000408276 93 ntBASIC4.48□□□□□ -1.69
CHGAP10645 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.48□□□□□ -1.69
CHGAP10645 AC009238.1-201ENST00000442165 424 ntBASIC4.48□□□□□ -1.69
CHGAP10645 AC009237.6-201ENST00000446969 424 ntBASIC4.48□□□□□ -1.69
CHGAP10645 TRBV12-1-201ENST00000479785 344 ntBASIC4.48□□□□□ -1.69
CHGAP10645 SUMO2P16-201ENST00000519475 264 ntBASIC4.48□□□□□ -1.69
CHGAP10645 NDUFB9P3-201ENST00000521269 501 ntBASIC4.48□□□□□ -1.69
CHGAP10645 AP003484.1-201ENST00000530974 250 ntBASIC4.48□□□□□ -1.69
CHGAP10645 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.48□□□□□ -1.69
CHGAP10645 MIR622-201ENST00000638396 96 ntBASIC4.48□□□□□ -1.69
CHGAP10645 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHGAP10645 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHGAP10645 RNU6-461P-201ENST00000364195 107 ntBASIC4.47□□□□□ -1.69
CHGAP10645 SNORA51.10-201ENST00000384418 136 ntBASIC4.47□□□□□ -1.69
CHGAP10645 RNU6-440P-201ENST00000390882 105 ntBASIC4.47□□□□□ -1.69
CHGAP10645 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.47□□□□□ -1.69
CHGAP10645 AL139132.1-201ENST00000431587 344 ntBASIC4.47□□□□□ -1.69
CHGAP10645 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.47□□□□□ -1.69
CHGAP10645 RNU6-830P-201ENST00000516353 107 ntBASIC4.47□□□□□ -1.69
CHGAP10645 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.47□□□□□ -1.69
CHGAP10645 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHGAP10645 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.47□□□□□ -1.69
CHGAP10645 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.47□□□□□ -1.69
CHGAP10645 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CHGAP10645 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CHGAP10645 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CHGAP10645 Y_RNA.454-201ENST00000384224 113 ntBASIC4.46□□□□□ -1.7
CHGAP10645 RNU6-938P-201ENST00000411285 103 ntBASIC4.46□□□□□ -1.7
CHGAP10645 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.46□□□□□ -1.7
CHGAP10645 AL109933.2-201ENST00000452651 260 ntBASIC4.46□□□□□ -1.7
CHGAP10645 RNU7-164P-201ENST00000459221 62 ntBASIC4.46□□□□□ -1.7
CHGAP10645 AC021205.2-201ENST00000480069 347 ntBASIC4.46□□□□□ -1.7
CHGAP10645 SNORA18.7-201ENST00000516910 131 ntBASIC4.46□□□□□ -1.7
CHGAP10645 U4atac.1-201ENST00000618345 95 ntBASIC4.46□□□□□ -1.7
CHGAP10645 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHGAP10645 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHGAP10645 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHGAP10645 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.45□□□□□ -1.7
CHGAP10645 Y_RNA.78-201ENST00000362970 110 ntBASIC4.45□□□□□ -1.7
CHGAP10645 RNA5SP493-201ENST00000364115 91 ntBASIC4.45□□□□□ -1.7
CHGAP10645 Y_RNA.265-201ENST00000364677 108 ntBASIC4.45□□□□□ -1.7
CHGAP10645 RNU6-1131P-201ENST00000364955 107 ntBASIC4.45□□□□□ -1.7
CHGAP10645 Y_RNA.351-201ENST00000365436 96 ntBASIC4.45□□□□□ -1.7
CHGAP10645 AL138878.1-201ENST00000405131 347 ntBASIC4.45□□□□□ -1.7
CHGAP10645 AC104332.2-201ENST00000429959 156 ntBASIC4.45□□□□□ -1.7
CHGAP10645 AL135938.1-201ENST00000443141 297 ntBASIC4.45□□□□□ -1.7
CHGAP10645 RN7SKP43-201ENST00000516173 320 ntBASIC4.45□□□□□ -1.7
CHGAP10645 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.45□□□□□ -1.7
CHGAP10645 Y_RNA.818-201ENST00000618813 71 ntBASIC4.45□□□□□ -1.7
CHGAP10645 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHGAP10645 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHGAP10645 Y_RNA.558-201ENST00000384685 113 ntBASIC4.44□□□□□ -1.7
CHGAP10645 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC4.44□□□□□ -1.7
CHGAP10645 AC245047.3-201ENST00000429428 127 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms