Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 AC098826.2-201ENST00000452011 651 ntBASIC0.28□□□□□ -2.36
HLA-AP01891 RNU6-329P-201ENST00000459618 107 ntBASIC0.28□□□□□ -2.36
HLA-AP01891 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.28□□□□□ -2.36
HLA-AP01891 AC093534.1-201ENST00000504977 132 ntBASIC0.28□□□□□ -2.36
HLA-AP01891 RNU2-12P-201ENST00000517216 168 ntBASIC0.28□□□□□ -2.36
HLA-AP01891 MTND2P38-201ENST00000522536 667 ntBASIC0.28□□□□□ -2.36
HLA-AP01891 AC018638.8-201ENST00000588755 281 ntBASIC0.28□□□□□ -2.36
HLA-AP01891 AC015540.1-201ENST00000615828 501 ntBASIC0.28□□□□□ -2.36
HLA-AP01891 AC007742.2-201ENST00000618226 398 ntBASIC0.28□□□□□ -2.36
HLA-AP01891 MIR4251-201ENST00000635819 61 ntBASIC0.28□□□□□ -2.36
HLA-AP01891 Y_RNA.89-201ENST00000363031 102 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 snoU2-30.1-201ENST00000365012 70 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 Y_RNA.361-201ENST00000365515 120 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 RNU6-926P-201ENST00000384075 107 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 MIR15B-201ENST00000385045 98 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 SNORD28B-201ENST00000390993 75 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 AL031003.1-201ENST00000404229 172 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 MRPS18CP6-201ENST00000423587 223 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.27□□□□□ -2.37
HLA-AP01891 RPL7P42-201ENST00000481005 679 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 RNU11-2P-201ENST00000516898 142 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.27□□□□□ -2.37
HLA-AP01891 MIR1244-1-201ENST00000612829 85 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 AC008133.2-201ENST00000624540 351 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.27□□□□□ -2.37
HLA-AP01891 MIR1244-3-201ENST00000635744 85 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 MIR1244-2-201ENST00000636449 85 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 MIR1244-4-202ENST00000636813 85 ntBASIC0.27□□□□□ -2.37
HLA-AP01891 RNY4P14-201ENST00000363656 96 ntBASIC0.26□□□□□ -2.37
HLA-AP01891 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
HLA-AP01891 MIR570-201ENST00000384917 97 ntBASIC0.26□□□□□ -2.37
HLA-AP01891 RNU6-131P-201ENST00000391144 107 ntBASIC0.26□□□□□ -2.37
HLA-AP01891 SNRPGP10-201ENST00000432323 225 ntBASIC0.26□□□□□ -2.37
HLA-AP01891 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
HLA-AP01891 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.26□□□□□ -2.37
HLA-AP01891 RNU6-1016P-201ENST00000516689 94 ntBASIC0.26□□□□□ -2.37
HLA-AP01891 MIR548AR-201ENST00000582191 57 ntBASIC0.26□□□□□ -2.37
HLA-AP01891 AC006380.1-201ENST00000603598 186 ntBASIC0.26□□□□□ -2.37
HLA-AP01891 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.26□□□□□ -2.37
HLA-AP01891 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.26□□□□□ -2.37
HLA-AP01891 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.26□□□□□ -2.37
HLA-AP01891 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
HLA-AP01891 Y_RNA.9-201ENST00000362354 101 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 Y_RNA.101-201ENST00000363154 102 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 Y_RNA.157-201ENST00000363638 102 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 RNU6-324P-201ENST00000363957 106 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 RNY1-201ENST00000364228 113 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 Y_RNA.295-201ENST00000364918 102 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 Y_RNA.368-201ENST00000365547 113 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 SNORD116-2-201ENST00000384274 95 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 SNORD116-6-201ENST00000384711 96 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 MIR181A1-201ENST00000385026 110 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.25□□□□□ -2.37
HLA-AP01891 RPS3AP52-201ENST00000435639 297 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
HLA-AP01891 AC105313.1-201ENST00000509121 353 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 Y_RNA.673-201ENST00000516306 88 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 AC005972.2-201ENST00000604690 348 ntBASIC0.25□□□□□ -2.37
HLA-AP01891 SNORD114-23-201ENST00000363536 72 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 Y_RNA.194-201ENST00000363985 102 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 Y_RNA.404-201ENST00000383978 102 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 MIR613-201ENST00000385248 95 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 MIR140-201ENST00000385282 100 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 MIR548F5-201ENST00000408421 86 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 MTCO2P27-201ENST00000420740 428 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.24□□□□□ -2.37
HLA-AP01891 MTND3P21-201ENST00000433774 331 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 MTND1P4-201ENST00000435196 415 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 HMGN2P32-201ENST00000444648 269 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 MTND3P10-201ENST00000450967 341 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 Y_RNA.708-201ENST00000516950 96 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 AC104695.3-201ENST00000604052 296 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 AL355073.2-201ENST00000612106 557 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 AC092794.2-201ENST00000620933 563 ntBASIC0.24□□□□□ -2.37
HLA-AP01891 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 Y_RNA.450-201ENST00000384198 113 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 RNU6-613P-201ENST00000410412 108 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 RNU2-61P-201ENST00000411069 191 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 RNU6-177P-201ENST00000411257 104 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 MTND2P22-201ENST00000444325 1033 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 MIR2053-201ENST00000459295 91 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 NDUFA4P2-201ENST00000489989 244 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 RNU6-1012P-201ENST00000516606 109 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 AC022616.4-201ENST00000522985 181 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 AC024909.2-201ENST00000553035 286 ntBASIC0.23□□□□□ -2.37
HLA-AP01891 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
HLA-AP01891 Y_RNA.118-201ENST00000363300 101 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 RNU6-99P-201ENST00000364721 107 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 RNU6-767P-201ENST00000384132 107 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 RNU6-601P-201ENST00000384540 107 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 MIR216A-201ENST00000385063 110 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 MIR548K-201ENST00000408406 116 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 RNA5SP118-201ENST00000410385 109 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 RPL30P15-201ENST00000457129 321 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 snoU13.21-201ENST00000459368 105 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.22□□□□□ -2.37
HLA-AP01891 AL162730.1-201ENST00000605734 292 ntBASIC0.22□□□□□ -2.37
HLA-AP01891 AC240442.1-201ENST00000616055 283 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms