Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.41□□□□□ -2.18
PHF1O43189 RNU4-80P-201ENST00000363200 141 ntBASIC1.41□□□□□ -2.18
PHF1O43189 RNU6-112P-201ENST00000363599 104 ntBASIC1.41□□□□□ -2.18
PHF1O43189 Y_RNA.172-201ENST00000363765 102 ntBASIC1.41□□□□□ -2.18
PHF1O43189 RNU6-407P-201ENST00000365280 104 ntBASIC1.41□□□□□ -2.18
PHF1O43189 Y_RNA.456-201ENST00000384232 111 ntBASIC1.41□□□□□ -2.18
PHF1O43189 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.41□□□□□ -2.18
PHF1O43189 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.41□□□□□ -2.18
PHF1O43189 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.41□□□□□ -2.18
PHF1O43189 RNU6-570P-201ENST00000517051 105 ntBASIC1.41□□□□□ -2.18
PHF1O43189 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.41□□□□□ -2.18
PHF1O43189 AC084364.2-201ENST00000546924 395 ntBASIC1.41□□□□□ -2.18
PHF1O43189 MIR3198-2-201ENST00000577868 80 ntBASIC1.41□□□□□ -2.18
PHF1O43189 MIR5094-201ENST00000578766 85 ntBASIC1.41□□□□□ -2.18
PHF1O43189 MIR4255-201ENST00000579351 72 ntBASIC1.41□□□□□ -2.18
PHF1O43189 MIR3145-201ENST00000580727 82 ntBASIC1.41□□□□□ -2.18
PHF1O43189 AC004832.4-201ENST00000608952 331 ntBASIC1.41□□□□□ -2.18
PHF1O43189 AL078604.3-201ENST00000615580 211 ntBASIC1.41□□□□□ -2.18
PHF1O43189 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.41□□□□□ -2.18
PHF1O43189 7SK.10-201ENST00000621414 298 ntBASIC1.41□□□□□ -2.18
PHF1O43189 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.41□□□□□ -2.18
PHF1O43189 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.18
PHF1O43189 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
PHF1O43189 SNORD114-26-201ENST00000363543 72 ntBASIC1.4□□□□□ -2.19
PHF1O43189 RNU6-324P-201ENST00000363957 106 ntBASIC1.4□□□□□ -2.19
PHF1O43189 Y_RNA.193-201ENST00000363979 102 ntBASIC1.4□□□□□ -2.19
PHF1O43189 Y_RNA.237-201ENST00000364439 102 ntBASIC1.4□□□□□ -2.19
PHF1O43189 SNORD116-13-201ENST00000384408 92 ntBASIC1.4□□□□□ -2.19
PHF1O43189 MIR1302-3-201ENST00000408128 138 ntBASIC1.4□□□□□ -2.19
PHF1O43189 MIR1302-6-201ENST00000408466 90 ntBASIC1.4□□□□□ -2.19
PHF1O43189 AL162725.1-201ENST00000435405 301 ntBASIC1.4□□□□□ -2.19
PHF1O43189 AC069257.2-201ENST00000441819 155 ntBASIC1.4□□□□□ -2.19
PHF1O43189 RPS20P10-201ENST00000451209 253 ntBASIC1.4□□□□□ -2.19
PHF1O43189 AC010409.1-201ENST00000487382 476 ntBASIC1.4□□□□□ -2.19
PHF1O43189 HMGN1P7-201ENST00000491722 313 ntBASIC1.4□□□□□ -2.19
PHF1O43189 AL163195.1-201ENST00000496941 348 ntBASIC1.4□□□□□ -2.19
PHF1O43189 RNU6-1278P-201ENST00000516130 107 ntBASIC1.4□□□□□ -2.19
PHF1O43189 RNU1-142P-201ENST00000516682 145 ntBASIC1.4□□□□□ -2.19
PHF1O43189 RNA5SP102-201ENST00000516865 106 ntBASIC1.4□□□□□ -2.19
PHF1O43189 RNU7-172P-201ENST00000517125 64 ntBASIC1.4□□□□□ -2.19
PHF1O43189 AC015720.1-201ENST00000565251 277 ntBASIC1.4□□□□□ -2.19
PHF1O43189 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
PHF1O43189 AC022217.4-201ENST00000604389 163 ntBASIC1.4□□□□□ -2.19
PHF1O43189 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.4□□□□□ -2.19
PHF1O43189 U4.1-201ENST00000620349 87 ntBASIC1.4□□□□□ -2.19
PHF1O43189 U6.104-201ENST00000637979 90 ntBASIC1.4□□□□□ -2.19
PHF1O43189 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.39□□□□□ -2.19
PHF1O43189 AC018630.2-201ENST00000534866 2403 ntBASIC1.39□□□□□ -2.19
PHF1O43189 MIR126-201ENST00000362291 85 ntBASIC1.39□□□□□ -2.19
PHF1O43189 RNU6-801P-201ENST00000364087 105 ntBASIC1.39□□□□□ -2.19
PHF1O43189 Y_RNA.217-201ENST00000364214 105 ntBASIC1.39□□□□□ -2.19
PHF1O43189 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.39□□□□□ -2.19
PHF1O43189 RNU6-196P-201ENST00000384315 107 ntBASIC1.39□□□□□ -2.19
PHF1O43189 RNU6-997P-201ENST00000384725 107 ntBASIC1.39□□□□□ -2.19
PHF1O43189 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
PHF1O43189 RNU6-1248P-201ENST00000391096 64 ntBASIC1.39□□□□□ -2.19
PHF1O43189 SNORA53-201ENST00000391141 249 ntBASIC1.39□□□□□ -2.19
PHF1O43189 AL606517.2-201ENST00000442855 241 ntBASIC1.39□□□□□ -2.19
PHF1O43189 SNORD127-201ENST00000458892 86 ntBASIC1.39□□□□□ -2.19
PHF1O43189 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
PHF1O43189 Y_RNA.641-201ENST00000459414 105 ntBASIC1.39□□□□□ -2.19
PHF1O43189 RNA5SP57-201ENST00000459463 123 ntBASIC1.39□□□□□ -2.19
PHF1O43189 RNA5SP437-201ENST00000517249 129 ntBASIC1.39□□□□□ -2.19
PHF1O43189 AC136628.3-201ENST00000521868 290 ntBASIC1.39□□□□□ -2.19
PHF1O43189 AC027419.1-201ENST00000522976 328 ntBASIC1.39□□□□□ -2.19
PHF1O43189 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.39□□□□□ -2.19
PHF1O43189 U2.14-201ENST00000615943 113 ntBASIC1.39□□□□□ -2.19
PHF1O43189 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
PHF1O43189 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
PHF1O43189 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.39□□□□□ -2.19
PHF1O43189 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
PHF1O43189 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.38□□□□□ -2.19
PHF1O43189 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PHF1O43189 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
PHF1O43189 SNORD58.1-201ENST00000391313 66 ntBASIC1.38□□□□□ -2.19
PHF1O43189 AC024067.1-201ENST00000426199 223 ntBASIC1.38□□□□□ -2.19
PHF1O43189 AC091959.1-201ENST00000495857 238 ntBASIC1.38□□□□□ -2.19
PHF1O43189 SNORA27.4-201ENST00000516650 95 ntBASIC1.38□□□□□ -2.19
PHF1O43189 DEFB108E-201ENST00000524692 240 ntBASIC1.38□□□□□ -2.19
PHF1O43189 AC004817.2-201ENST00000561794 651 ntBASIC1.38□□□□□ -2.19
PHF1O43189 MIR3149-201ENST00000584629 83 ntBASIC1.38□□□□□ -2.19
PHF1O43189 AC073413.2-201ENST00000604332 360 ntBASIC1.38□□□□□ -2.19
PHF1O43189 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
PHF1O43189 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.38□□□□□ -2.19
PHF1O43189 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.38□□□□□ -2.19
PHF1O43189 MIR6079-201ENST00000635807 62 ntBASIC1.38□□□□□ -2.19
PHF1O43189 Y_RNA.14-201ENST00000362415 103 ntBASIC1.37□□□□□ -2.19
PHF1O43189 Y_RNA.275-201ENST00000364726 110 ntBASIC1.37□□□□□ -2.19
PHF1O43189 Y_RNA.288-201ENST00000364854 92 ntBASIC1.37□□□□□ -2.19
PHF1O43189 SNORD114-22-201ENST00000365423 72 ntBASIC1.37□□□□□ -2.19
PHF1O43189 RNU6-1323P-201ENST00000384025 107 ntBASIC1.37□□□□□ -2.19
PHF1O43189 SNORA72.4-201ENST00000384174 132 ntBASIC1.37□□□□□ -2.19
PHF1O43189 MIR520A-201ENST00000384862 85 ntBASIC1.37□□□□□ -2.19
PHF1O43189 MIR520G-201ENST00000385064 90 ntBASIC1.37□□□□□ -2.19
PHF1O43189 RNU11-5P-201ENST00000391216 129 ntBASIC1.37□□□□□ -2.19
PHF1O43189 RNU6-855P-201ENST00000410395 104 ntBASIC1.37□□□□□ -2.19
PHF1O43189 RNU6-1186P-201ENST00000410429 97 ntBASIC1.37□□□□□ -2.19
PHF1O43189 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
PHF1O43189 RNU7-94P-201ENST00000459576 63 ntBASIC1.37□□□□□ -2.19
PHF1O43189 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms