Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNU6-190P-201ENST00000384154 102 ntBASIC-1.53□□□□□ -2.65
RGPD3A6NKT7 RNU6-784P-201ENST00000384330 106 ntBASIC-1.53□□□□□ -2.65
RGPD3A6NKT7 HLA-S-202ENST00000425174 53 ntBASIC-1.53□□□□□ -2.65
RGPD3A6NKT7 SNORD22.1-201ENST00000516331 125 ntBASIC-1.53□□□□□ -2.65
RGPD3A6NKT7 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.53□□□□□ -2.65
RGPD3A6NKT7 AP001836.1-201ENST00000604675 523 ntBASIC-1.53□□□□□ -2.65
RGPD3A6NKT7 AC099785.1-201ENST00000605697 437 ntBASIC-1.53□□□□□ -2.65
RGPD3A6NKT7 MTCO1P27-201ENST00000448269 226 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 MRPS10P1-201ENST00000448483 130 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 AF186996.7-201ENST00000492781 209 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 MIR4770-201ENST00000579149 58 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 AC012409.4-201ENST00000612923 249 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 AC008873.1-201ENST00000625051 138 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 RNU6-119P-201ENST00000364882 107 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 SNORA24-201ENST00000384096 131 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 RNU6-847P-201ENST00000411115 108 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 RPL39P25-201ENST00000449384 154 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 RNU6-175P-201ENST00000516896 107 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 RNU7-181P-201ENST00000517234 74 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 AP000942.4-201ENST00000604811 241 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 AL354950.2-201ENST00000617939 290 ntBASIC-1.54□□□□□ -2.66
RGPD3A6NKT7 RNU6-403P-201ENST00000363163 104 ntBASIC-1.55□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.55□□□□□ -2.66
RGPD3A6NKT7 SNORD74.6-201ENST00000364796 70 ntBASIC-1.55□□□□□ -2.66
RGPD3A6NKT7 RNU4-66P-201ENST00000365199 138 ntBASIC-1.55□□□□□ -2.66
RGPD3A6NKT7 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.55□□□□□ -2.66
RGPD3A6NKT7 MTND3P8-201ENST00000412909 339 ntBASIC-1.55□□□□□ -2.66
RGPD3A6NKT7 SNORD45.4-201ENST00000516629 73 ntBASIC-1.55□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.55□□□□□ -2.66
RGPD3A6NKT7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.55□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.56□□□□□ -2.66
RGPD3A6NKT7 RNU6-407P-201ENST00000365280 104 ntBASIC-1.56□□□□□ -2.66
RGPD3A6NKT7 RNA5SP261-201ENST00000410536 106 ntBASIC-1.56□□□□□ -2.66
RGPD3A6NKT7 AL158050.1-201ENST00000416077 457 ntBASIC-1.56□□□□□ -2.66
RGPD3A6NKT7 AC091959.1-201ENST00000495857 238 ntBASIC-1.56□□□□□ -2.66
RGPD3A6NKT7 RNU2-13P-201ENST00000515909 113 ntBASIC-1.56□□□□□ -2.66
RGPD3A6NKT7 RNU6-323P-201ENST00000521915 107 ntBASIC-1.56□□□□□ -2.66
RGPD3A6NKT7 AC069545.1-201ENST00000605671 358 ntBASIC-1.56□□□□□ -2.66
RGPD3A6NKT7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.56□□□□□ -2.66
RGPD3A6NKT7 SNORD114-29-201ENST00000364819 70 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 RNU6-541P-201ENST00000384709 110 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 DEFB131E-201ENST00000532329 154 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 SNORD11B-201ENST00000607707 90 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 RNU6-865P-201ENST00000364772 107 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 MIR588-201ENST00000384900 83 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 MIR517B-201ENST00000385102 67 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 MTCO2P6-201ENST00000463134 685 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 AC010598.1-201ENST00000510378 103 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 AL450270.1-201ENST00000606160 391 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 MIR6082-201ENST00000613604 109 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 MIR382-201ENST00000637119 76 ntBASIC-1.57□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 SNORD115-42-201ENST00000364273 82 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 SNORD87-201ENST00000364849 89 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 RNU6-702P-201ENST00000364982 107 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 SNORA1.2-201ENST00000365189 134 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 RNU6-900P-201ENST00000384498 102 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 SEPT14P24-201ENST00000447236 180 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 SNORA25.14-201ENST00000516481 132 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 AC107934.1-201ENST00000522215 217 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 MIR5708-201ENST00000579723 85 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 AC073648.5-201ENST00000603502 305 ntBASIC-1.58□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 RNU6-354P-201ENST00000383862 107 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 RNU6-610P-201ENST00000384264 107 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 RNU6-136P-201ENST00000384663 107 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 MTND1P32-201ENST00000433043 938 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 RNY4P37-201ENST00000516225 96 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 SNORA25.13-201ENST00000516395 103 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 MIR5591-201ENST00000578248 65 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 RNU6-61P-201ENST00000365528 109 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 RNU6-431P-201ENST00000383874 107 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 MTND4P3-201ENST00000417829 541 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 AC022137.1-201ENST00000483735 151 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 AC068587.4-201ENST00000533893 186 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 MIR4423-201ENST00000580922 80 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 AL049777.1-201ENST00000622740 518 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 AC126544.2-201ENST00000625174 749 ntBASIC-1.59□□□□□ -2.66
RGPD3A6NKT7 U8.15-201ENST00000390947 134 ntBASIC-1.6□□□□□ -2.67
RGPD3A6NKT7 MTCYBP4-201ENST00000401524 249 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms