Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC073464.1-201ENST00000429823 534 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 RNU2-13P-201ENST00000515909 113 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 PIGPP4-201ENST00000584447 307 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 MIR4999-201ENST00000585029 91 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 AP000811.1-201ENST00000603803 651 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 AL158211.2-201ENST00000607282 395 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 AC022306.2-201ENST00000617563 647 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 AC006927.3-201ENST00000638789 384 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 MIR655-201ENST00000362159 97 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 SNORD50.1-201ENST00000362987 71 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-280P-201ENST00000364145 104 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 SNORA63C-201ENST00000364578 129 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-325P-201ENST00000411132 105 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 RPL30P16-201ENST00000419341 429 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 MTATP6P26-201ENST00000445926 662 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 AC006600.1-201ENST00000572529 153 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 Z84480.1-201ENST00000605131 311 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 AC006566.1-201ENST00000608943 513 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 RN7SL660P-201ENST00000614852 299 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 AC134878.1-201ENST00000619901 243 ntBASIC-0.73□□□□□ -2.53
TRAV17A0A0B4J275 SNORD114-7-201ENST00000362520 77 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-740P-201ENST00000364734 105 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-811P-201ENST00000384069 107 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 MIR215-201ENST00000384858 110 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 MIR588-201ENST00000384900 83 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 MIR563-201ENST00000385080 79 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 AL590002.1-201ENST00000406554 418 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 AC244250.2-201ENST00000418731 148 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 AC105029.1-201ENST00000520250 669 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 MIR4677-201ENST00000584153 80 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 MIR4263-201ENST00000584745 83 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 AL590491.3-201ENST00000610731 82 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 AC244669.1-204ENST00000621564 178 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 AL391099.1-201ENST00000624635 187 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 U6.115-201ENST00000636045 103 ntBASIC-0.74□□□□□ -2.53
TRAV17A0A0B4J275 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 MIR153-2-201ENST00000385225 87 ntBASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-131P-201ENST00000391144 107 ntBASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-903P-201ENST00000391270 109 ntBASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-195P-201ENST00000411352 109 ntBASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 AL008987.1-201ENST00000415528 237 ntBASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 AL158063.1-201ENST00000615349 536 ntBASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 AC072046.2-201ENST00000618366 268 ntBASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.75□□□□□ -2.53
TRAV17A0A0B4J275 MIR148A-201ENST00000362215 68 ntBASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 SNORD115-24-201ENST00000363528 82 ntBASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 RNU4-84P-201ENST00000364200 139 ntBASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 SNORD38C-201ENST00000384381 69 ntBASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-636P-201ENST00000384598 107 ntBASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 MTND4P19-201ENST00000446659 478 ntBASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 AC109327.2-201ENST00000448339 378 ntBASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 MIR4639-201ENST00000584938 69 ntBASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.76□□□□□ -2.53
TRAV17A0A0B4J275 MTND5P32-201ENST00000560711 1802 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 SNORA25.7-201ENST00000364375 127 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-541P-201ENST00000384709 110 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 SNORA75.1-201ENST00000391130 148 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 MTCO3P40-201ENST00000392516 676 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 FCF1P9-201ENST00000412546 282 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 AC084290.1-201ENST00000434995 374 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 AC009961.2-201ENST00000435771 251 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 RNU7-73P-201ENST00000458743 63 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 RPL30P10-201ENST00000488148 337 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-135P-201ENST00000516769 101 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 NAMPTP3-201ENST00000569273 224 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 AC069431.2-201ENST00000604149 1099 ntBASIC-0.77□□□□□ -2.53
TRAV17A0A0B4J275 MIR30D-201ENST00000362283 70 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 RNU6-500P-201ENST00000362349 107 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 RNA5SP205-201ENST00000364653 136 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 SNORA75.4-201ENST00000391278 119 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 RNU4-83P-201ENST00000410863 133 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 RNU2-72P-201ENST00000411175 163 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 SNRPGP14-201ENST00000435400 219 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 RNU7-180P-201ENST00000459240 63 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 CCDC34P1-201ENST00000507441 517 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 AL157687.1-201ENST00000554853 619 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 AC138749.4-201ENST00000563970 127 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 MIR4436A-201ENST00000585278 85 ntBASIC-0.78□□□□□ -2.53
TRAV17A0A0B4J275 AC096720.1-201ENST00000604441 183 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms