Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 MIR26B-201ENST00000362251 77 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 MIR337-201ENST00000362281 93 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 RNA5SP482-201ENST00000391269 118 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 AC015922.2-201ENST00000435593 184 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 RN7SKP88-201ENST00000516847 250 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 RN7SKP295-201ENST00000517264 153 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 AL133255.1-201ENST00000606374 441 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 SNORD58B-201ENST00000607313 66 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 7SK.8-201ENST00000612110 250 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 7SK.11-201ENST00000615477 250 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 7SK.13-201ENST00000622040 250 ntBASIC1.16□□□□□ -2.22
ATG4BQ9Y4P1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-199P-201ENST00000362954 107 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 RNU4-41P-201ENST00000364426 143 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 RNU1-115P-201ENST00000365329 160 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.419-201ENST00000384041 102 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 RNY1P14-201ENST00000384426 108 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 MIR653-201ENST00000385279 96 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 AC022028.1-201ENST00000412054 408 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 AL162725.1-201ENST00000435405 301 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 RPS4XP11-201ENST00000446897 772 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 HSPE1P13-201ENST00000451143 297 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-436P-201ENST00000516171 114 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 AC022441.3-201ENST00000605737 136 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.772-201ENST00000606692 102 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 AL050343.2-201ENST00000607338 280 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 AC007485.1-201ENST00000616755 206 ntBASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
ATG4BQ9Y4P1 MIR369-201ENST00000362155 70 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 SNORD68-201ENST00000363214 84 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.197-201ENST00000364004 102 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 SNORA70.7-201ENST00000384159 133 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.570-201ENST00000384750 101 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 RNU2-61P-201ENST00000411069 191 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 AC005042.3-201ENST00000453230 174 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-1170P-201ENST00000515974 106 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 RNU7-110P-201ENST00000516891 62 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 AL080274.1-201ENST00000605565 220 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 LARP7P1-201ENST00000605576 316 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 AC068647.2-201ENST00000637380 353 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 AC091812.1-201ENST00000432235 1948 ntBASIC1.14□□□□□ -2.23
ATG4BQ9Y4P1 SNORA25.8-201ENST00000364831 128 ntBASIC1.13□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-308P-201ENST00000390957 107 ntBASIC1.13□□□□□ -2.23
ATG4BQ9Y4P1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.13□□□□□ -2.23
ATG4BQ9Y4P1 Z98949.2-201ENST00000440996 144 ntBASIC1.13□□□□□ -2.23
ATG4BQ9Y4P1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.13□□□□□ -2.23
ATG4BQ9Y4P1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.13□□□□□ -2.23
ATG4BQ9Y4P1 SNORA40.14-201ENST00000516543 86 ntBASIC1.13□□□□□ -2.23
ATG4BQ9Y4P1 AL117336.2-201ENST00000602435 335 ntBASIC1.13□□□□□ -2.23
ATG4BQ9Y4P1 AL121655.1-201ENST00000605811 308 ntBASIC1.13□□□□□ -2.23
ATG4BQ9Y4P1 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.813-201ENST00000364639 102 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.471-201ENST00000384312 102 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-855P-201ENST00000410395 104 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 MCFD2P1-201ENST00000417812 300 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 AC104332.1-201ENST00000440471 797 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 SNORD116-28-201ENST00000516123 91 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-947P-201ENST00000516264 106 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 AC011604.1-201ENST00000545978 196 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 AC004832.4-201ENST00000608952 331 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 AC010205.1-201ENST00000616668 449 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 AL008636.1-201ENST00000625038 1018 ntBASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
ATG4BQ9Y4P1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 MIRLET7C-201ENST00000362160 84 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 SNORA2.2-201ENST00000365473 135 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 Y_RNA.439-201ENST00000384119 94 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-937P-201ENST00000384325 106 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-163P-201ENST00000384396 106 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 RNU4-30P-201ENST00000410245 143 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 PIGPP3-201ENST00000425307 415 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-917P-201ENST00000516294 104 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 RNU6-165P-201ENST00000517170 99 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 AC040926.1-201ENST00000530195 238 ntBASIC1.11□□□□□ -2.23
ATG4BQ9Y4P1 AC090049.2-201ENST00000550377 109 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms