Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MIR4790-201ENST00000577799 79 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 AC103591.3-201ENST00000608684 209 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 AL591926.4-201ENST00000616895 298 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
TREX1Q9NSU2 RNY1P16-201ENST00000363063 111 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.358-201ENST00000365491 99 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 SNORD14.1-201ENST00000365609 90 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.517-201ENST00000384551 106 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 MIR136-201ENST00000385207 82 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 AL390729.2-201ENST00000416137 156 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 AL139396.1-201ENST00000421137 167 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.44□□□□□ -2.34
TREX1Q9NSU2 MTND1P17-201ENST00000448961 204 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 U8.22-201ENST00000459141 133 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.44□□□□□ -2.34
TREX1Q9NSU2 SNORA18.7-201ENST00000516910 131 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 SNORA74.3-201ENST00000517108 154 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 MIR4711-201ENST00000578274 70 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 MIR5701-3-201ENST00000578890 82 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 MIR5701-1-201ENST00000585138 82 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 RNU6-94P-201ENST00000607728 107 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 MIR5701-2-201ENST00000615634 82 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.44□□□□□ -2.34
TREX1Q9NSU2 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
TREX1Q9NSU2 MIR410-201ENST00000362222 80 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 RNU6-1084P-201ENST00000362498 107 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 RNA5SP457-201ENST00000363657 124 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.43□□□□□ -2.34
TREX1Q9NSU2 MTCYBP10-201ENST00000424905 650 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AC092423.1-201ENST00000430165 186 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AL353997.1-201ENST00000432936 108 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 MTND1P29-201ENST00000448112 647 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AC098826.2-201ENST00000452011 651 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AC098869.1-201ENST00000481627 292 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 RNU6-496P-201ENST00000516145 99 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AC011195.1-201ENST00000578177 177 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AC005828.6-201ENST00000606610 232 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AC005014.2-201ENST00000607795 599 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 AL136317.1-201ENST00000612653 226 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 MIR924-201ENST00000638017 53 ntBASIC0.43□□□□□ -2.34
TREX1Q9NSU2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
TREX1Q9NSU2 RNU6-874P-201ENST00000362390 105 ntBASIC0.42□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.243-201ENST00000364481 109 ntBASIC0.42□□□□□ -2.34
TREX1Q9NSU2 RNU6-1310P-201ENST00000384153 107 ntBASIC0.42□□□□□ -2.34
TREX1Q9NSU2 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
TREX1Q9NSU2 RNU6-1110P-201ENST00000516462 101 ntBASIC0.42□□□□□ -2.34
TREX1Q9NSU2 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
TREX1Q9NSU2 MIR4764-201ENST00000580680 88 ntBASIC0.42□□□□□ -2.34
TREX1Q9NSU2 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.41-201ENST00000362646 102 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 SNORA36.2-201ENST00000384004 127 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 SNORD116-2-201ENST00000384274 95 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 SNORD116-6-201ENST00000384711 96 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 RNU6-1148P-201ENST00000410992 104 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 RNA5SP222-201ENST00000411039 105 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 AC074085.1-201ENST00000413598 418 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.41□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.682-201ENST00000516457 100 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 RNU6-1337P-201ENST00000516525 95 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 MTND4LP26-201ENST00000518144 282 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 MTND2P38-201ENST00000522536 667 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 AP003716.2-201ENST00000528260 108 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 AC093027.1-201ENST00000546698 429 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 AC018462.2-201ENST00000605375 395 ntBASIC0.41□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.9-201ENST00000362354 101 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 SNORD114-7-201ENST00000362520 77 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 RNU6-318P-201ENST00000384283 103 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 RNU1-119P-201ENST00000391122 165 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 SNORD12B-201ENST00000410433 91 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 RNU4-49P-201ENST00000516080 140 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 AC105029.1-201ENST00000520250 669 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 AC036111.3-201ENST00000526389 112 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 MIR4300-201ENST00000581016 96 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 AC015540.1-201ENST00000615828 501 ntBASIC0.4□□□□□ -2.35
TREX1Q9NSU2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.4□□□□□ -2.35
TREX1Q9NSU2 MIR330-201ENST00000362196 94 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 RNA5SP48-201ENST00000363969 126 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 U8.5-201ENST00000364528 136 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 Y_RNA.301-201ENST00000364990 103 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 RNU6-1067P-201ENST00000384752 107 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 MIR181A1-201ENST00000385026 110 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 MIR15B-201ENST00000385045 98 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 SNORD111-201ENST00000408139 94 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 MTND3P21-201ENST00000433774 331 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.39□□□□□ -2.35
TREX1Q9NSU2 AC026782.1-201ENST00000512952 449 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 RNU6-408P-201ENST00000515910 100 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 RN7SKP164-201ENST00000516138 266 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 SNORD45.4-201ENST00000516629 73 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 AF235103.2-201ENST00000525753 346 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 MIR4762-201ENST00000585261 75 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 AC004467.1-201ENST00000615678 330 ntBASIC0.39□□□□□ -2.35
TREX1Q9NSU2 Y_RNA.157-201ENST00000363638 102 ntBASIC0.38□□□□□ -2.35
TREX1Q9NSU2 RNY4P14-201ENST00000363656 96 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms