Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MIR1253-201ENST00000408273 105 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 AL445687.1-201ENST00000439946 251 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 AP001486.1-201ENST00000463339 476 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-1291P-201ENST00000516591 104 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-586P-201ENST00000517265 104 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 AC022217.4-201ENST00000604389 163 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 AC007179.3-201ENST00000604976 235 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 U2.20-201ENST00000613956 192 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 ZNF720P1-201ENST00000562403 1939 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 Z83843.1-201ENST00000604070 3685 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 RNU1-96P-201ENST00000364163 162 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 Y_RNA.242-201ENST00000364473 110 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 U8.17-201ENST00000391292 132 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 RPL39P25-201ENST00000449384 154 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 RNU7-164P-201ENST00000459221 62 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 RNU7-123P-201ENST00000515911 60 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 RNA5SP490-201ENST00000517141 136 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 AC022523.2-201ENST00000561045 150 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 MIR4276-201ENST00000584832 70 ntBASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
NUCKS1Q9H1E3 Y_RNA.410-201ENST00000383992 113 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-813P-201ENST00000384691 107 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 MIR767-201ENST00000390228 109 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 RPL21P3-201ENST00000395517 478 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-1186P-201ENST00000410429 97 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 AC005326.1-201ENST00000429197 123 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 RNA5SP57-201ENST00000459463 123 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 SCARNA23-201ENST00000516060 130 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 RNA5SP395-201ENST00000516567 118 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 DEFB131E-201ENST00000532329 154 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 AC087685.1-201ENST00000587507 141 ntBASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUCKS1Q9H1E3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 ZNF271P-202ENST00000465539 1970 ntBASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 MIR126-201ENST00000362291 85 ntBASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 RNY3P2-201ENST00000362918 102 ntBASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 RNU4-36P-201ENST00000364294 144 ntBASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-1189P-201ENST00000383958 107 ntBASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 RNY1P6-201ENST00000384193 109 ntBASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 MIR548O-201ENST00000408583 114 ntBASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-856P-201ENST00000516959 98 ntBASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 MIR3163-201ENST00000581592 73 ntBASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NUCKS1Q9H1E3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
NUCKS1Q9H1E3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.290-201ENST00000364879 114 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 SNORA46-201ENST00000384762 135 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-972P-201ENST00000391208 107 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 HMGN2P34-201ENST00000437647 269 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 AC009238.1-201ENST00000442165 424 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 AC009237.6-201ENST00000446969 424 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 RN7SL601P-201ENST00000471221 293 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 RN7SL499P-201ENST00000481141 276 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 RNU7-128P-201ENST00000517247 62 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 FAM71BP1-201ENST00000604431 523 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 MIR3202-2-201ENST00000635980 79 ntBASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NUCKS1Q9H1E3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-816P-201ENST00000390914 107 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-1268P-201ENST00000391214 107 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-1239P-201ENST00000391310 107 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 MIR1255A-201ENST00000408338 113 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 MIR1912-201ENST00000410389 80 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 RNA5SP120-201ENST00000410900 112 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 RPS15AP28-201ENST00000435088 386 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 UQCRHP3-201ENST00000451503 251 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 AC022137.1-201ENST00000483735 151 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 SNORA4.4-201ENST00000515921 135 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 AC018630.2-201ENST00000534866 2403 ntBASIC3.45□□□□□ -1.86
NUCKS1Q9H1E3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 AC060773.1-201ENST00000421698 310 ntBASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 RPS12P18-201ENST00000442381 270 ntBASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 BX510359.1-201ENST00000456973 237 ntBASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 AL031183.1-201ENST00000457667 207 ntBASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 RNU7-99P-201ENST00000516271 62 ntBASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 RNU7-70P-201ENST00000516941 66 ntBASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 AC007229.1-201ENST00000590455 412 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms