Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC025754.2-201ENST00000606491 432 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PKP4Q99569 SNORA27.1-201ENST00000362604 124 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 RNU6-923P-201ENST00000364753 107 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 Y_RNA.332-201ENST00000365271 113 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 Y_RNA.435-201ENST00000384095 112 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 SNORA72.4-201ENST00000384174 132 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 RNU6-160P-201ENST00000384591 107 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 SNORA26.5-201ENST00000391215 123 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 COX6CP10-201ENST00000416832 224 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 AC123900.1-201ENST00000420390 96 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 HSPE1P13-201ENST00000451143 297 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 SNORD65B-201ENST00000459126 73 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 AC010531.2-201ENST00000465012 153 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 RNY3P16-201ENST00000516338 101 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.94□□□□□ -2.1
PKP4Q99569 AC022254.1-201ENST00000567857 235 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.94□□□□□ -2.1
PKP4Q99569 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.94□□□□□ -2.1
PKP4Q99569 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PKP4Q99569 Y_RNA.124-201ENST00000363339 93 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 RNU6-682P-201ENST00000363843 106 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 RNU6-899P-201ENST00000363947 107 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 RNU6-493P-201ENST00000391321 108 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PKP4Q99569 MTCO1P44-201ENST00000441935 243 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 AL357134.1-201ENST00000445848 426 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 RNU6-991P-201ENST00000516168 107 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 RNU6-861P-201ENST00000516745 106 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.93□□□□□ -2.1
PKP4Q99569 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.93□□□□□ -2.1
PKP4Q99569 MIR4308-201ENST00000580634 81 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 MIR4713-201ENST00000582691 75 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.93□□□□□ -2.1
PKP4Q99569 AC013791.1-201ENST00000616619 62 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 AC006435.5-201ENST00000624486 112 ntBASIC1.93□□□□□ -2.1
PKP4Q99569 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
PKP4Q99569 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.92□□□□□ -2.1
PKP4Q99569 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PKP4Q99569 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PKP4Q99569 Y_RNA.233-201ENST00000364407 101 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 RNU6-1240P-201ENST00000365155 104 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 MIR504-201ENST00000385065 83 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 PCNPP3-201ENST00000393579 471 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 SUMO1P3-201ENST00000439961 304 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 RPL23AP42-201ENST00000471152 471 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 RPS26P55-201ENST00000471178 356 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.92□□□□□ -2.1
PKP4Q99569 AC022559.1-201ENST00000520905 205 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 AC087441.2-201ENST00000529141 262 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.92□□□□□ -2.1
PKP4Q99569 AL365434.2-201ENST00000607979 234 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 AC134026.1-201ENST00000623249 2239 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 AC092881.1-201ENST00000638218 2733 ntBASIC1.92□□□□□ -2.1
PKP4Q99569 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PKP4Q99569 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PKP4Q99569 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PKP4Q99569 RNU6-1048P-201ENST00000364054 107 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 RNU6-407P-201ENST00000365280 104 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 Y_RNA.464-201ENST00000384282 110 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 MTCO2P33-201ENST00000402100 465 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 AC016909.1-201ENST00000415916 166 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 RPS20P10-201ENST00000451209 253 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 snoU13.15-201ENST00000459407 104 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 RNA5SP20-201ENST00000515976 84 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 RNU6-1337P-201ENST00000516525 95 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.91□□□□□ -2.1
PKP4Q99569 MIR3124-201ENST00000582636 67 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.91□□□□□ -2.1
PKP4Q99569 U6.106-201ENST00000636360 105 ntBASIC1.91□□□□□ -2.1
PKP4Q99569 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
PKP4Q99569 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
PKP4Q99569 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
PKP4Q99569 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PKP4Q99569 Y_RNA.172-201ENST00000363765 102 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 RNU4-17P-201ENST00000365598 141 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 MIR597-201ENST00000384968 97 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 SNORA48.1-201ENST00000390879 135 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 RNA5SP501-201ENST00000410990 112 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.9□□□□□ -2.11
PKP4Q99569 AC010154.1-201ENST00000425857 269 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.9□□□□□ -2.11
PKP4Q99569 RNU1-131P-201ENST00000458943 161 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 RNU7-141P-201ENST00000459304 62 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.9□□□□□ -2.11
PKP4Q99569 Y_RNA.662-201ENST00000516028 97 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 RNU6-856P-201ENST00000516959 98 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 SUMO2P18-201ENST00000518873 252 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 AC027419.1-201ENST00000522976 328 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 AC100767.1-201ENST00000528178 123 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.9□□□□□ -2.11
PKP4Q99569 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
PKP4Q99569 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms