Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.47□□□□□ -2.17
CMTM3Q96MX0 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
CMTM3Q96MX0 MIR3145-201ENST00000580727 82 ntBASIC1.47□□□□□ -2.17
CMTM3Q96MX0 AL356055.1-201ENST00000602528 446 ntBASIC1.47□□□□□ -2.17
CMTM3Q96MX0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.47□□□□□ -2.17
CMTM3Q96MX0 AL591926.4-201ENST00000616895 298 ntBASIC1.47□□□□□ -2.17
CMTM3Q96MX0 AC068647.2-201ENST00000637380 353 ntBASIC1.47□□□□□ -2.17
CMTM3Q96MX0 SNORD68-201ENST00000363214 84 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 RNU6-457P-201ENST00000363999 107 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 MIR653-201ENST00000385279 96 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 RNU6-1248P-201ENST00000391096 64 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 AL590004.1-201ENST00000405321 300 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 AC005534.2-201ENST00000431047 433 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 AC093850.1-201ENST00000454121 251 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 RPL30P7-201ENST00000479312 323 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 RNA5SP182-201ENST00000516064 82 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 MIR3664-201ENST00000579074 99 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 MIR4680-201ENST00000580906 66 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 MIR4762-201ENST00000585261 75 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 AC044792.1-201ENST00000593294 196 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 AC027279.3-201ENST00000625055 122 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
CMTM3Q96MX0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CMTM3Q96MX0 U8.5-201ENST00000364528 136 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.527-201ENST00000384573 102 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 MIR583-201ENST00000384846 75 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.602-201ENST00000410535 92 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.45□□□□□ -2.18
CMTM3Q96MX0 CYCTP-201ENST00000504253 315 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 RNU6-496P-201ENST00000516145 99 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 AC113195.1-201ENST00000579952 141 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 POLR3GP1-201ENST00000594073 261 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 AL355297.3-201ENST00000604082 446 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 AP003357.1-201ENST00000604497 148 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.45□□□□□ -2.18
CMTM3Q96MX0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CMTM3Q96MX0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CMTM3Q96MX0 RNU6-833P-201ENST00000363486 107 ntBASIC1.44□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.253-201ENST00000364562 112 ntBASIC1.44□□□□□ -2.18
CMTM3Q96MX0 RNU6-1227P-201ENST00000383981 107 ntBASIC1.44□□□□□ -2.18
CMTM3Q96MX0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CMTM3Q96MX0 MIR891A-201ENST00000401237 79 ntBASIC1.44□□□□□ -2.18
CMTM3Q96MX0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.44□□□□□ -2.18
CMTM3Q96MX0 SNORA40.15-201ENST00000516884 107 ntBASIC1.44□□□□□ -2.18
CMTM3Q96MX0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.44□□□□□ -2.18
CMTM3Q96MX0 AC136628.3-201ENST00000521868 290 ntBASIC1.44□□□□□ -2.18
CMTM3Q96MX0 AC090049.2-201ENST00000550377 109 ntBASIC1.44□□□□□ -2.18
CMTM3Q96MX0 AC120024.3-201ENST00000603167 156 ntBASIC1.44□□□□□ -2.18
CMTM3Q96MX0 RNU4-90P-201ENST00000362773 141 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 RNU4-80P-201ENST00000363200 141 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 RNU6-770P-201ENST00000363929 105 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.276-201ENST00000364732 109 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 RNA5SP126-201ENST00000365092 109 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 SNORA33.2-201ENST00000365413 134 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 RNU6-163P-201ENST00000384396 106 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 HSPE1P25-201ENST00000455484 251 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 RNU6-250P-201ENST00000516958 103 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 CYP3A52P-201ENST00000563326 91 ntBASIC1.43□□□□□ -2.18
CMTM3Q96MX0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.136-201ENST00000363444 102 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.152-201ENST00000363578 100 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.214-201ENST00000364201 112 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 U8.7-201ENST00000364940 136 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 SNORA2.2-201ENST00000365473 135 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 RNU6-102P-201ENST00000384485 104 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 MIR522-201ENST00000385071 87 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 MIR9-3-201ENST00000385084 90 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.581-201ENST00000391017 97 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 RNU6-121P-201ENST00000410525 99 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.42□□□□□ -2.18
CMTM3Q96MX0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.42□□□□□ -2.18
CMTM3Q96MX0 ELOCP20-201ENST00000422460 345 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 HMGN1P7-201ENST00000491722 313 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 RPS29P11-201ENST00000496507 171 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 RNU6-322P-201ENST00000516010 103 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 RNU6-917P-201ENST00000516294 104 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 RNU7-115P-201ENST00000516433 55 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 AC131281.1-201ENST00000522984 164 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 AC024405.2-202ENST00000532731 184 ntBASIC1.42□□□□□ -2.18
CMTM3Q96MX0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CMTM3Q96MX0 SNORD114-1-201ENST00000362705 72 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.105-201ENST00000363182 111 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.418-201ENST00000384029 102 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 RNU6-639P-201ENST00000384074 107 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.569-201ENST00000384749 103 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 PIGPP3-201ENST00000425307 415 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 AC104332.1-201ENST00000440471 797 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 LINC01399-202ENST00000458450 244 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 AC117454.1-201ENST00000491120 168 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 AC114811.1-201ENST00000507207 168 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 RNU6-191P-201ENST00000516295 94 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 RNU6-1153P-201ENST00000516760 105 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 RN7SKP88-201ENST00000516847 250 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms