Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 RNA5SP511-201ENST00000410487 115 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 AL162725.1-201ENST00000435405 301 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 RPS26P45-201ENST00000471748 340 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 AC015720.1-201ENST00000565251 277 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 AC005972.2-201ENST00000604690 348 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 BX284668.6-201ENST00000606899 438 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 U6.108-201ENST00000637764 58 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 RNU6-1272P-201ENST00000362776 107 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 RNU6-740P-201ENST00000364734 105 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.277-201ENST00000364754 102 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 SNORA72.4-201ENST00000384174 132 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 MIR489-201ENST00000384923 84 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 MIR520G-201ENST00000385064 90 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 MT-TG-201ENST00000387429 68 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 AL135790.2-201ENST00000437701 267 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 AC003989.2-201ENST00000440224 169 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 RNU6-1023P-201ENST00000516137 106 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.679-201ENST00000516416 91 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 AC084364.2-201ENST00000546924 395 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 AC010900.2-201ENST00000604508 210 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 AL359821.1-201ENST00000605519 182 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 AL078604.3-201ENST00000615580 211 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 AC018630.2-201ENST00000534866 2403 ntBASIC2.18□□□□□ -2.06
TRIM43Q96BQ3 RNU6-801P-201ENST00000364087 105 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.476-201ENST00000384347 108 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 MIR562-201ENST00000384894 95 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 RNU4-62P-201ENST00000410125 130 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 AP1B1P2-201ENST00000416196 106 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 BTF3P11-201ENST00000426582 477 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 TRMT112P2-201ENST00000512910 132 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 MIR514B-201ENST00000516774 80 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 RNU7-116P-201ENST00000516940 62 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 MIR3683-201ENST00000580847 82 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 MIR6079-201ENST00000635807 62 ntBASIC2.17□□□□□ -2.06
TRIM43Q96BQ3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.60-201ENST00000362831 98 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 RNU6-763P-201ENST00000390865 106 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 RNU2-7P-201ENST00000410794 178 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 AC245047.4-201ENST00000433189 144 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 AC104332.1-201ENST00000440471 797 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 RNA5SP57-201ENST00000459463 123 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 MIR5089-201ENST00000580047 84 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 ZNF702P-202ENST00000434269 1966 ntBASIC2.16□□□□□ -2.06
TRIM43Q96BQ3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
TRIM43Q96BQ3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 RNU6-899P-201ENST00000363947 107 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 MIR520A-201ENST00000384862 85 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 SNORA26.5-201ENST00000391215 123 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 MTCO2P33-201ENST00000402100 465 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 AC091021.1-201ENST00000468051 388 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 MTND1P19-201ENST00000511780 315 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.680-201ENST00000516441 93 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 SUB1P4-201ENST00000566062 339 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 MIR548AY-201ENST00000617669 107 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 snoU18.1-201ENST00000629629 71 ntBASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRIM43Q96BQ3 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 AC134026.1-201ENST00000623249 2239 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 RNA5SP276-201ENST00000362580 94 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.82-201ENST00000363000 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.92-201ENST00000363043 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 RNY1P10-201ENST00000363268 113 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.235-201ENST00000364412 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.306-201ENST00000365015 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 SNORA25.9-201ENST00000365087 128 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.312-201ENST00000365089 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.322-201ENST00000365151 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 AL627390.1-201ENST00000396055 340 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms