Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 MIR424-201ENST00000362227 98 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.16-201ENST00000362421 102 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 RNU1-22P-201ENST00000363334 158 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.145-201ENST00000363527 102 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 SNORA7.1-201ENST00000363750 139 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 SNORA4.2-201ENST00000365313 147 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.361-201ENST00000365515 120 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 SNORD116-13-201ENST00000384408 92 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 RNU6-505P-201ENST00000384427 107 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 RNU6-21P-201ENST00000384710 107 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 RNU6-1109P-201ENST00000391187 107 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 AL135790.2-201ENST00000437701 267 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 AC005042.3-201ENST00000453230 174 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 AC025465.3-201ENST00000510570 311 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 RNA5SP445-201ENST00000515889 115 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 RNU6-496P-201ENST00000516145 99 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 RNU6-570P-201ENST00000517051 105 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 AL161670.1-201ENST00000554348 137 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 AC008269.2-201ENST00000561915 1105 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 AC136443.5-201ENST00000603741 370 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 AC006435.5-201ENST00000624486 112 ntBASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.57□□□□□ -2.16
LYSMD4Q5XG99 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 RNU6-414P-201ENST00000363705 104 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.541-201ENST00000384640 113 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 RNU6-360P-201ENST00000390944 104 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 MIR873-201ENST00000401120 77 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 SUMO2P12-201ENST00000405924 140 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 MIR548F4-201ENST00000408515 105 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 AC097462.1-201ENST00000514125 324 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 RNU6-1337P-201ENST00000516525 95 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 RNU7-172P-201ENST00000517125 64 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 AP003733.2-201ENST00000529409 171 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 AC073413.2-201ENST00000604332 360 ntBASIC1.56□□□□□ -2.16
LYSMD4Q5XG99 RNU6-1309P-201ENST00000363305 108 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.383-201ENST00000383855 97 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.418-201ENST00000384029 102 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 RPS27P1-201ENST00000450552 247 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 RPS26P55-201ENST00000471178 356 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 RPS26P45-201ENST00000471748 340 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 RNU7-99P-201ENST00000516271 62 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.713-201ENST00000517013 96 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 MIR4421-201ENST00000578133 69 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 AC022217.4-201ENST00000604389 163 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 AL157834.3-201ENST00000615543 103 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.55□□□□□ -2.16
LYSMD4Q5XG99 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 RNU4-80P-201ENST00000363200 141 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 RNU6-117P-201ENST00000365415 107 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 RNU6-1105P-201ENST00000384774 107 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 MIR568-201ENST00000385036 95 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 MIR1276-201ENST00000408707 83 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 RNA5SP511-201ENST00000410487 115 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 RNU2-61P-201ENST00000411069 191 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 AL358176.2-201ENST00000425769 204 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 AC010154.1-201ENST00000425857 269 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 FTH1P12-201ENST00000432137 551 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 snoU13.9-201ENST00000458927 103 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 snoU13.27-201ENST00000459278 104 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 snoU13.18-201ENST00000459483 104 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 AC005908.1-201ENST00000468701 347 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 SNORD113-5-201ENST00000607261 78 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 MIR6504-201ENST00000613520 61 ntBASIC1.54□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.84-201ENST00000363011 104 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.152-201ENST00000363578 100 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.276-201ENST00000364732 109 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.376-201ENST00000365638 108 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 MIR489-201ENST00000384923 84 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 Y_RNA.581-201ENST00000391017 97 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 MIR1267-201ENST00000408723 78 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 COX6CP10-201ENST00000416832 224 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 JTBP1-201ENST00000441314 247 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 AL731563.1-201ENST00000442202 214 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 AC091021.1-201ENST00000468051 388 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 SEPT14P8-201ENST00000508026 178 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 AL117187.1-201ENST00000555482 181 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 AC024614.2-201ENST00000577584 372 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
LYSMD4Q5XG99 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms