Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 Y_RNA.304-201ENST00000365011 112 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 RNY4P28-201ENST00000365281 93 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NKX6-1P78426 AC245047.3-201ENST00000429428 127 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 AC108059.2-201ENST00000434626 151 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 RNU6-437P-201ENST00000459408 95 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 RNA5SP57-201ENST00000459463 123 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 AC108210.2-201ENST00000503681 201 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.19□□□□□ -2.06
NKX6-1P78426 SNORD116-28-201ENST00000516123 91 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 RNA5SP320-201ENST00000516263 124 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 RNU2-56P-201ENST00000516826 190 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 AP002004.2-201ENST00000531656 154 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 AC015712.3-201ENST00000559380 164 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 Y_RNA.802-201ENST00000614892 130 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 AL365265.1-201ENST00000621045 234 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.19□□□□□ -2.06
NKX6-1P78426 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.19□□□□□ -2.06
NKX6-1P78426 AC100821.1-201ENST00000523153 2479 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 ZNF702P-202ENST00000434269 1966 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 Y_RNA.83-201ENST00000363005 113 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 SNORA8.3-201ENST00000384679 139 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 SNORA80E-201ENST00000384744 137 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NKX6-1P78426 Y_RNA.626-201ENST00000411288 95 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 Y_RNA.676-201ENST00000516393 96 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 RNU6-1291P-201ENST00000516591 104 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 MIR5688-201ENST00000580619 83 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 MIR2681-201ENST00000581814 105 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 MIR5092-201ENST00000583139 88 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 AL137847.3-201ENST00000611521 109 ntBASIC2.18□□□□□ -2.06
NKX6-1P78426 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
NKX6-1P78426 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
NKX6-1P78426 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NKX6-1P78426 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
NKX6-1P78426 MIR367-201ENST00000362299 68 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 RNA5SP276-201ENST00000362580 94 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 RNU6-112P-201ENST00000363599 104 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 SNORA63D-201ENST00000364359 132 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 RNA5SP109-201ENST00000391010 116 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 RNA5SP210-201ENST00000391034 120 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 RNA5SP212-201ENST00000391223 107 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 AL158823.1-201ENST00000418441 478 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 AL591806.2-201ENST00000433122 173 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.17□□□□□ -2.06
NKX6-1P78426 RNA5SP481-201ENST00000516814 122 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 MIR4724-201ENST00000579485 89 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 AC022217.4-201ENST00000604389 163 ntBASIC2.17□□□□□ -2.06
NKX6-1P78426 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NKX6-1P78426 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NKX6-1P78426 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NKX6-1P78426 MIR526A2-201ENST00000390198 65 ntBASIC2.16□□□□□ -2.06
NKX6-1P78426 RNU6-482P-201ENST00000391068 107 ntBASIC2.16□□□□□ -2.06
NKX6-1P78426 AL512604.1-201ENST00000404812 257 ntBASIC2.16□□□□□ -2.06
NKX6-1P78426 RN7SKP200-201ENST00000410564 320 ntBASIC2.16□□□□□ -2.06
NKX6-1P78426 RN7SKP223-201ENST00000410582 62 ntBASIC2.16□□□□□ -2.06
NKX6-1P78426 AL139156.1-201ENST00000412785 841 ntBASIC2.16□□□□□ -2.06
NKX6-1P78426 AL356320.1-201ENST00000429616 163 ntBASIC2.16□□□□□ -2.06
NKX6-1P78426 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.16□□□□□ -2.06
NKX6-1P78426 AL049830.1-201ENST00000468034 425 ntBASIC2.16□□□□□ -2.06
NKX6-1P78426 MIR4287-201ENST00000579398 78 ntBASIC2.16□□□□□ -2.06
NKX6-1P78426 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NKX6-1P78426 RNU6-674P-201ENST00000363831 107 ntBASIC2.15□□□□□ -2.07
NKX6-1P78426 RNA5SP456-201ENST00000364002 114 ntBASIC2.15□□□□□ -2.07
NKX6-1P78426 Y_RNA.203-201ENST00000364106 102 ntBASIC2.15□□□□□ -2.07
NKX6-1P78426 RNU6-200P-201ENST00000364743 107 ntBASIC2.15□□□□□ -2.07
NKX6-1P78426 RNU7-28P-201ENST00000516759 62 ntBASIC2.15□□□□□ -2.07
NKX6-1P78426 AC130289.1-201ENST00000577321 73 ntBASIC2.15□□□□□ -2.07
NKX6-1P78426 SNORA28-201ENST00000606769 126 ntBASIC2.15□□□□□ -2.07
NKX6-1P78426 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NKX6-1P78426 SNORA1B-201ENST00000362535 133 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 Y_RNA.265-201ENST00000364677 108 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 RNU6-1080P-201ENST00000383982 107 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 SNORA6-201ENST00000384033 151 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 RNU6-440P-201ENST00000390882 105 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 MIR1289-2-201ENST00000408360 111 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 RNA5SP100-201ENST00000410903 110 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 RNA5SP59-201ENST00000410922 110 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 COX6CP10-201ENST00000416832 224 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 RPS27P1-201ENST00000450552 247 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 AC023449.1-201ENST00000454464 154 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.14□□□□□ -2.07
NKX6-1P78426 RNA5SP82-201ENST00000516707 92 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 Y_RNA.714-201ENST00000517065 90 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 MIR3668-201ENST00000582138 75 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 AL929325.1-201ENST00000603096 117 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 Z83818.1-201ENST00000603584 150 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 AC011921.3-201ENST00000605540 361 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 MIR8054-201ENST00000620877 86 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.14□□□□□ -2.07
NKX6-1P78426 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
NKX6-1P78426 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NKX6-1P78426 RNU4-41P-201ENST00000364426 143 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 Y_RNA.308-201ENST00000365043 101 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 RNU6-296P-201ENST00000384608 107 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 AL359511.1-201ENST00000402970 211 ntBASIC2.13□□□□□ -2.07
NKX6-1P78426 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms