Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNU6-454P-201ENST00000364292 107 ntBASIC-0.54□□□□□ -2.5
TPM4P67936 RNA5SP128-201ENST00000365305 116 ntBASIC-0.54□□□□□ -2.5
TPM4P67936 RNU6-364P-201ENST00000384387 107 ntBASIC-0.54□□□□□ -2.5
TPM4P67936 RNU6-131P-201ENST00000391144 107 ntBASIC-0.54□□□□□ -2.5
TPM4P67936 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.54□□□□□ -2.5
TPM4P67936 AC069271.1-201ENST00000445577 156 ntBASIC-0.54□□□□□ -2.5
TPM4P67936 RNA5SP401-201ENST00000515920 127 ntBASIC-0.54□□□□□ -2.5
TPM4P67936 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.54□□□□□ -2.5
TPM4P67936 MIR5696-201ENST00000578474 85 ntBASIC-0.54□□□□□ -2.5
TPM4P67936 AC079248.2-201ENST00000623779 326 ntBASIC-0.54□□□□□ -2.5
TPM4P67936 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 RNU6-128P-201ENST00000383976 107 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 SNORD38C-201ENST00000384381 69 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 RNY3P10-201ENST00000384764 102 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 MTND3P23-201ENST00000431980 347 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 AC104692.1-201ENST00000472406 90 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.55□□□□□ -2.5
TPM4P67936 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.55□□□□□ -2.5
TPM4P67936 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.55□□□□□ -2.5
TPM4P67936 SNORA18.4-201ENST00000516440 124 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 RNU6-232P-201ENST00000517144 64 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 MTCO2P4-201ENST00000517968 247 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 AC022616.4-201ENST00000522985 181 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.55□□□□□ -2.5
TPM4P67936 MIR4305-201ENST00000583252 102 ntBASIC-0.55□□□□□ -2.5
TPM4P67936 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 RNU4-20P-201ENST00000365601 151 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.56□□□□□ -2.5
TPM4P67936 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.56□□□□□ -2.5
TPM4P67936 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.56□□□□□ -2.5
TPM4P67936 RNU7-125P-201ENST00000458760 62 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 RNU7-62P-201ENST00000458856 62 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 RNU6-848P-201ENST00000515948 107 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 ACA59.1-201ENST00000515966 143 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 RNU6-617P-201ENST00000516147 107 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 RNU6-473P-201ENST00000516164 107 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 RNU6-830P-201ENST00000516353 107 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.56□□□□□ -2.5
TPM4P67936 SNORD92-201ENST00000585078 85 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 AC109347.2-201ENST00000610220 349 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 MIR8087-201ENST00000612745 78 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 AL357075.2-201ENST00000614906 189 ntBASIC-0.56□□□□□ -2.5
TPM4P67936 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 MIR329-1-201ENST00000385028 80 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 MIR125B2-201ENST00000385128 89 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 MIR892B-201ENST00000401279 77 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 MTND2P18-201ENST00000419962 1030 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 AL358176.2-201ENST00000425769 204 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 USP9YP16-201ENST00000430287 407 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 SNRPGP10-201ENST00000432323 225 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 AL606489.2-201ENST00000433886 234 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 USP9YP23-201ENST00000455085 407 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 RNU7-129P-201ENST00000516128 62 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 AC090617.3-201ENST00000573670 475 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 MIR1273G-201ENST00000577677 100 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 MIR4791-201ENST00000607666 84 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.57□□□□□ -2.5
TPM4P67936 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.57□□□□□ -2.5
TPM4P67936 AC099654.12-201ENST00000639868 649 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 AC121333.1-201ENST00000567488 2709 ntBASIC-0.57□□□□□ -2.5
TPM4P67936 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.58□□□□□ -2.5
TPM4P67936 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.58□□□□□ -2.5
TPM4P67936 MTCO2P19-201ENST00000427513 598 ntBASIC-0.58□□□□□ -2.5
TPM4P67936 HMGN1P10-201ENST00000474557 553 ntBASIC-0.58□□□□□ -2.5
TPM4P67936 RNU4-49P-201ENST00000516080 140 ntBASIC-0.58□□□□□ -2.5
TPM4P67936 RNU6-448P-201ENST00000517052 107 ntBASIC-0.58□□□□□ -2.5
TPM4P67936 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.58□□□□□ -2.5
TPM4P67936 AC125232.2-201ENST00000592457 143 ntBASIC-0.58□□□□□ -2.5
TPM4P67936 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 RNU6-925P-201ENST00000384629 104 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 U8.17-201ENST00000391292 132 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 MTCO2P27-201ENST00000420740 428 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 AL031667.1-201ENST00000440222 725 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 MIR18B-201ENST00000454574 71 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 U8.19-201ENST00000459095 133 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 U8.22-201ENST00000459141 133 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 RNU6-759P-201ENST00000516740 103 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 AC060788.1-201ENST00000521318 469 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 AC018448.1-201ENST00000552843 316 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 AC011712.1-201ENST00000588959 234 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 uc_338.6-201ENST00000613544 171 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 Pinc.1-201ENST00000616452 154 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 MIR3674-201ENST00000636576 68 ntBASIC-0.59□□□□□ -2.5
TPM4P67936 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.59□□□□□ -2.5
TPM4P67936 SNORD14E-201ENST00000364009 85 ntBASIC-0.6□□□□□ -2.51
TPM4P67936 SNORA63C-201ENST00000364578 129 ntBASIC-0.6□□□□□ -2.51
TPM4P67936 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.6□□□□□ -2.51
TPM4P67936 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.6□□□□□ -2.51
TPM4P67936 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
TPM4P67936 AL353193.1-201ENST00000421444 268 ntBASIC-0.6□□□□□ -2.51
TPM4P67936 USMG5P1-201ENST00000425964 177 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms