Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC097462.1-201ENST00000514125 324 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 SCARNA11.3-201ENST00000517276 130 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
EPHB3P54753 uc_338.28-201ENST00000612082 187 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
EPHB3P54753 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
EPHB3P54753 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
EPHB3P54753 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
EPHB3P54753 MTND5P18-201ENST00000445624 1801 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
EPHB3P54753 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.86□□□□□ -1.95
EPHB3P54753 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
EPHB3P54753 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
EPHB3P54753 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.85□□□□□ -1.95
EPHB3P54753 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.85□□□□□ -1.95
EPHB3P54753 RNU4-82P-201ENST00000362443 140 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 Y_RNA.116-201ENST00000363292 103 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 RNU6-1209P-201ENST00000363655 107 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 RNU6-1240P-201ENST00000365155 104 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 RNU6-301P-201ENST00000384277 107 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 MIR548A1-201ENST00000385041 97 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 MTATP6P21-201ENST00000440681 189 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 OR9P1P-201ENST00000496431 281 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 SNORA18.4-201ENST00000516440 124 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 RNU7-149P-201ENST00000516739 59 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.85□□□□□ -1.95
EPHB3P54753 MIR4765-201ENST00000585007 77 ntBASIC2.85□□□□□ -1.95
EPHB3P54753 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
EPHB3P54753 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
EPHB3P54753 RNU1-72P-201ENST00000362976 153 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 Y_RNA.281-201ENST00000364774 94 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 RNA5SP126-201ENST00000365092 109 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 U8.9-201ENST00000365667 134 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 SNORA26.7-201ENST00000391288 122 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 MIR1302-4-201ENST00000408701 150 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 AF228730.3-201ENST00000436691 102 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.84□□□□□ -1.95
EPHB3P54753 AC003982.1-202ENST00000469928 248 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 RNA5SP236-201ENST00000516169 116 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 MIR4435-1-201ENST00000582552 80 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 Pinc.1-201ENST00000616452 154 ntBASIC2.84□□□□□ -1.95
EPHB3P54753 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
EPHB3P54753 RNU6-486P-201ENST00000363116 107 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 RNU6-1083P-201ENST00000384022 107 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 RNU6-418P-201ENST00000384035 107 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 Y_RNA.486-201ENST00000384398 107 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 RNU6-106P-201ENST00000384405 107 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 RN7SKP284-201ENST00000411002 343 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 AL513477.1-202ENST00000417061 214 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.83□□□□□ -1.96
EPHB3P54753 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.83□□□□□ -1.96
EPHB3P54753 AC244505.4-201ENST00000434905 287 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 SSXP5-201ENST00000443473 287 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 Z96811.1-201ENST00000445880 108 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 AL021397.1-201ENST00000451806 248 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 SCARNA17.1-201ENST00000516211 143 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 SCARNA17.2-201ENST00000516334 143 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 Y_RNA.677-201ENST00000516401 85 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 IGKV1-22-201ENST00000524313 326 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.83□□□□□ -1.96
EPHB3P54753 AC011604.1-201ENST00000545978 196 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 MIR3605-201ENST00000583214 100 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 MIR3117-201ENST00000584034 78 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 MIR4438-201ENST00000585271 93 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 SCARNA17.4-201ENST00000614296 143 ntBASIC2.83□□□□□ -1.96
EPHB3P54753 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
EPHB3P54753 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
EPHB3P54753 RNA5SP68-201ENST00000363885 119 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 AC104332.2-201ENST00000429959 156 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 AC018634.1-201ENST00000437554 401 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 RN7SL429P-201ENST00000479090 223 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 RN7SL489P-201ENST00000486185 223 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 RN7SL327P-201ENST00000488659 223 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 RNU6-412P-201ENST00000516434 106 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 RNU6-365P-201ENST00000517113 106 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 RNU7-172P-201ENST00000517125 64 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 RNU6-844P-201ENST00000517175 102 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 AC013412.1-201ENST00000610687 192 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 MIR6817-201ENST00000615588 66 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 RN7SL853P-201ENST00000617250 223 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
EPHB3P54753 AC093831.2-201ENST00000624393 3427 ntBASIC2.82□□□□□ -1.96
EPHB3P54753 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
EPHB3P54753 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
EPHB3P54753 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
EPHB3P54753 RNU6-554P-201ENST00000410466 106 ntBASIC2.81□□□□□ -1.96
EPHB3P54753 AP004217.1-201ENST00000480579 346 ntBASIC2.81□□□□□ -1.96
EPHB3P54753 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.81□□□□□ -1.96
EPHB3P54753 SNORA9.3-201ENST00000516383 129 ntBASIC2.81□□□□□ -1.96
EPHB3P54753 RNU6-56P-201ENST00000516986 93 ntBASIC2.81□□□□□ -1.96
EPHB3P54753 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
EPHB3P54753 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
EPHB3P54753 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.81□□□□□ -1.96
EPHB3P54753 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.81□□□□□ -1.96
EPHB3P54753 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
EPHB3P54753 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
EPHB3P54753 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
EPHB3P54753 RNU6-1292P-201ENST00000383856 107 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms