Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 RN7SKP282-201ENST00000516824 299 ntBASIC2.84□□□□□ -1.95
SYPP08247 RNU2-60P-201ENST00000517290 128 ntBASIC2.84□□□□□ -1.95
SYPP08247 NDUFA5P6-201ENST00000542110 379 ntBASIC2.84□□□□□ -1.95
SYPP08247 AC007229.1-201ENST00000590455 412 ntBASIC2.84□□□□□ -1.95
SYPP08247 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.84□□□□□ -1.95
SYPP08247 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SYPP08247 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
SYPP08247 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.96
SYPP08247 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
SYPP08247 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SYPP08247 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SYPP08247 RNU6-859P-201ENST00000362728 107 ntBASIC2.83□□□□□ -1.96
SYPP08247 Y_RNA.66-201ENST00000362862 102 ntBASIC2.83□□□□□ -1.96
SYPP08247 RNU6-461P-201ENST00000364195 107 ntBASIC2.83□□□□□ -1.96
SYPP08247 MIR9-1-201ENST00000385198 89 ntBASIC2.83□□□□□ -1.96
SYPP08247 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SYPP08247 RNU6-1064P-201ENST00000410626 104 ntBASIC2.83□□□□□ -1.96
SYPP08247 AL158147.1-201ENST00000443970 75 ntBASIC2.83□□□□□ -1.96
SYPP08247 UQCRHP3-201ENST00000451503 251 ntBASIC2.83□□□□□ -1.96
SYPP08247 RN7SL20P-201ENST00000488827 297 ntBASIC2.83□□□□□ -1.96
SYPP08247 RNA5SP385-201ENST00000515947 110 ntBASIC2.83□□□□□ -1.96
SYPP08247 RNU6-772P-201ENST00000516042 105 ntBASIC2.83□□□□□ -1.96
SYPP08247 AC091544.4-201ENST00000555268 342 ntBASIC2.83□□□□□ -1.96
SYPP08247 MIR3121-201ENST00000579680 77 ntBASIC2.83□□□□□ -1.96
SYPP08247 AL353149.1-201ENST00000610667 244 ntBASIC2.83□□□□□ -1.96
SYPP08247 AC007318.2-201ENST00000620999 243 ntBASIC2.83□□□□□ -1.96
SYPP08247 MIR338-201ENST00000636369 67 ntBASIC2.83□□□□□ -1.96
SYPP08247 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.83□□□□□ -1.96
SYPP08247 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SYPP08247 RNU6-429P-201ENST00000384582 108 ntBASIC2.82□□□□□ -1.96
SYPP08247 RNU6-476P-201ENST00000384726 107 ntBASIC2.82□□□□□ -1.96
SYPP08247 SNORA46-201ENST00000384762 135 ntBASIC2.82□□□□□ -1.96
SYPP08247 Y_RNA.621-201ENST00000411065 96 ntBASIC2.82□□□□□ -1.96
SYPP08247 SRIP3-201ENST00000413200 219 ntBASIC2.82□□□□□ -1.96
SYPP08247 MLLT10P1-201ENST00000418346 262 ntBASIC2.82□□□□□ -1.96
SYPP08247 RPS15AP28-201ENST00000435088 386 ntBASIC2.82□□□□□ -1.96
SYPP08247 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.82□□□□□ -1.96
SYPP08247 AC007751.1-201ENST00000529260 376 ntBASIC2.82□□□□□ -1.96
SYPP08247 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.82□□□□□ -1.96
SYPP08247 MIR3914-2-201ENST00000637339 95 ntBASIC2.82□□□□□ -1.96
SYPP08247 U6.108-201ENST00000637764 58 ntBASIC2.82□□□□□ -1.96
SYPP08247 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.82□□□□□ -1.96
SYPP08247 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.82□□□□□ -1.96
SYPP08247 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SYPP08247 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.81□□□□□ -1.96
SYPP08247 RNA5SP432-201ENST00000362480 116 ntBASIC2.81□□□□□ -1.96
SYPP08247 RNU6-153P-201ENST00000364422 104 ntBASIC2.81□□□□□ -1.96
SYPP08247 RNA5SP125-201ENST00000364843 120 ntBASIC2.81□□□□□ -1.96
SYPP08247 SNORA25B-201ENST00000365507 128 ntBASIC2.81□□□□□ -1.96
SYPP08247 RNA5SP467-201ENST00000391274 118 ntBASIC2.81□□□□□ -1.96
SYPP08247 AL603914.1-201ENST00000401964 204 ntBASIC2.81□□□□□ -1.96
SYPP08247 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.81□□□□□ -1.96
SYPP08247 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.81□□□□□ -1.96
SYPP08247 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.81□□□□□ -1.96
SYPP08247 HMGN1P7-201ENST00000491722 313 ntBASIC2.81□□□□□ -1.96
SYPP08247 RNU6-1041P-201ENST00000516254 102 ntBASIC2.81□□□□□ -1.96
SYPP08247 RNU6-365P-201ENST00000517113 106 ntBASIC2.81□□□□□ -1.96
SYPP08247 AL365205.2-201ENST00000594586 68 ntBASIC2.81□□□□□ -1.96
SYPP08247 AL359075.3-201ENST00000613288 217 ntBASIC2.81□□□□□ -1.96
SYPP08247 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.81□□□□□ -1.96
SYPP08247 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.81□□□□□ -1.96
SYPP08247 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.81□□□□□ -1.96
SYPP08247 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SYPP08247 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.81□□□□□ -1.96
SYPP08247 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SYPP08247 AL391516.1-201ENST00000554380 2449 ntBASIC2.8□□□□□ -1.96
SYPP08247 Y_RNA.114-201ENST00000363265 113 ntBASIC2.8□□□□□ -1.96
SYPP08247 Y_RNA.253-201ENST00000364562 112 ntBASIC2.8□□□□□ -1.96
SYPP08247 RNU6-1144P-201ENST00000384247 104 ntBASIC2.8□□□□□ -1.96
SYPP08247 MIR624-201ENST00000385217 97 ntBASIC2.8□□□□□ -1.96
SYPP08247 SNORA40.5-201ENST00000391061 128 ntBASIC2.8□□□□□ -1.96
SYPP08247 RNU11-5P-201ENST00000391216 129 ntBASIC2.8□□□□□ -1.96
SYPP08247 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.8□□□□□ -1.96
SYPP08247 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.8□□□□□ -1.96
SYPP08247 AL513328.1-201ENST00000446460 224 ntBASIC2.8□□□□□ -1.96
SYPP08247 YWHAEP4-201ENST00000505390 198 ntBASIC2.8□□□□□ -1.96
SYPP08247 MRPS17P9-201ENST00000511924 393 ntBASIC2.8□□□□□ -1.96
SYPP08247 RNU6-1291P-201ENST00000516591 104 ntBASIC2.8□□□□□ -1.96
SYPP08247 MIR3616-201ENST00000584070 92 ntBASIC2.8□□□□□ -1.96
SYPP08247 MIR4506-201ENST00000584693 77 ntBASIC2.8□□□□□ -1.96
SYPP08247 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.8□□□□□ -1.96
SYPP08247 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.8□□□□□ -1.96
SYPP08247 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
SYPP08247 AC018630.2-201ENST00000534866 2403 ntBASIC2.79□□□□□ -1.96
SYPP08247 Y_RNA.99-201ENST00000363138 105 ntBASIC2.79□□□□□ -1.96
SYPP08247 SNORD114-6-201ENST00000364393 72 ntBASIC2.79□□□□□ -1.96
SYPP08247 SNORA70B-201ENST00000384210 135 ntBASIC2.79□□□□□ -1.96
SYPP08247 RN7SKP123-201ENST00000410732 291 ntBASIC2.79□□□□□ -1.96
SYPP08247 RNA5SP127-201ENST00000411051 133 ntBASIC2.79□□□□□ -1.96
SYPP08247 EDDM3CP-201ENST00000415977 425 ntBASIC2.79□□□□□ -1.96
SYPP08247 SNRPGP10-201ENST00000432323 225 ntBASIC2.79□□□□□ -1.96
SYPP08247 AC233266.1-201ENST00000454518 96 ntBASIC2.79□□□□□ -1.96
SYPP08247 Y_RNA.690-201ENST00000516603 95 ntBASIC2.79□□□□□ -1.96
SYPP08247 RNU6-341P-201ENST00000516973 96 ntBASIC2.79□□□□□ -1.96
SYPP08247 SNORA31.26-201ENST00000517250 137 ntBASIC2.79□□□□□ -1.96
SYPP08247 AC242852.1-201ENST00000612151 96 ntBASIC2.79□□□□□ -1.96
SYPP08247 MIR6129-201ENST00000616087 109 ntBASIC2.79□□□□□ -1.96
SYPP08247 AL590808.1-201ENST00000618696 141 ntBASIC2.79□□□□□ -1.96
SYPP08247 AC244015.1-201ENST00000622301 99 ntBASIC2.79□□□□□ -1.96
SYPP08247 MIR6079-201ENST00000635807 62 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 260.5 ms