Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SNORA31.2-201ENST00000516019 134 ntBASIC1□□□□□ -2.25
TRIM3O75382 RNU6-155P-201ENST00000516347 100 ntBASIC1□□□□□ -2.25
TRIM3O75382 RNA5SP102-201ENST00000516865 106 ntBASIC1□□□□□ -2.25
TRIM3O75382 AL355375.2-201ENST00000574825 175 ntBASIC1□□□□□ -2.25
TRIM3O75382 AL022345.2-201ENST00000606307 135 ntBASIC1□□□□□ -2.25
TRIM3O75382 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
TRIM3O75382 SNORD114-7-201ENST00000362520 77 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 SNORD68-201ENST00000363214 84 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 Y_RNA.446-201ENST00000384178 104 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 RNU6-1199P-201ENST00000411249 104 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 PIGPP3-201ENST00000425307 415 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 AL162725.1-201ENST00000435405 301 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 Y_RNA.632-201ENST00000459189 102 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 RNU6-322P-201ENST00000516010 103 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 SNORA70.12-201ENST00000516084 153 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 U6.92-201ENST00000636464 89 ntBASIC0.99□□□□□ -2.25
TRIM3O75382 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
TRIM3O75382 SNORA2.2-201ENST00000365473 135 ntBASIC0.98□□□□□ -2.25
TRIM3O75382 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
TRIM3O75382 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.98□□□□□ -2.25
TRIM3O75382 UBL5P1-201ENST00000507979 193 ntBASIC0.98□□□□□ -2.25
TRIM3O75382 RNU6-436P-201ENST00000516171 114 ntBASIC0.98□□□□□ -2.25
TRIM3O75382 SNORA70.22-201ENST00000517160 124 ntBASIC0.98□□□□□ -2.25
TRIM3O75382 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.98□□□□□ -2.25
TRIM3O75382 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.98□□□□□ -2.25
TRIM3O75382 AC006600.1-201ENST00000572529 153 ntBASIC0.98□□□□□ -2.25
TRIM3O75382 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.98□□□□□ -2.25
TRIM3O75382 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
TRIM3O75382 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 Y_RNA.356-201ENST00000365475 113 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 Y_RNA.428-201ENST00000384078 102 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 Y_RNA.463-201ENST00000384271 102 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 RNU6-163P-201ENST00000384396 106 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 RNU6-910P-201ENST00000390844 107 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.97□□□□□ -2.25
TRIM3O75382 RPS23P4-201ENST00000487908 423 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 RNU6-875P-201ENST00000516488 106 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 AL358944.1-201ENST00000528537 144 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 FAM106DP-201ENST00000586416 501 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 AC012676.2-201ENST00000619258 186 ntBASIC0.97□□□□□ -2.25
TRIM3O75382 SNORA25.9-201ENST00000365087 128 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 Y_RNA.529-201ENST00000384586 119 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 MIR526A1-201ENST00000384897 85 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 MIR891A-201ENST00000401237 79 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.96□□□□□ -2.26
TRIM3O75382 MTCO2P27-201ENST00000420740 428 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.96□□□□□ -2.26
TRIM3O75382 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.96□□□□□ -2.26
TRIM3O75382 AC114811.1-201ENST00000507207 168 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
TRIM3O75382 Y_RNA.661-201ENST00000516003 99 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 RNU6-507P-201ENST00000516045 100 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 SNORD116-28-201ENST00000516123 91 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 RNU6-911P-201ENST00000516523 104 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 SNORD116.3-201ENST00000517176 78 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 AC011604.1-201ENST00000545978 196 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 AC136932.1-201ENST00000574771 208 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
TRIM3O75382 AC120024.3-201ENST00000603167 156 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 AC104985.2-201ENST00000620598 500 ntBASIC0.96□□□□□ -2.26
TRIM3O75382 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.96□□□□□ -2.26
TRIM3O75382 MIR96-201ENST00000362288 78 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 Y_RNA.27-201ENST00000362540 103 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 Y_RNA.329-201ENST00000365209 107 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 MIR499A-201ENST00000384903 122 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 RNU2-61P-201ENST00000411069 191 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.95□□□□□ -2.26
TRIM3O75382 MLLT10P1-201ENST00000418346 262 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.95□□□□□ -2.26
TRIM3O75382 AC093019.1-201ENST00000443135 252 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 SNORA31.4-201ENST00000516049 129 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 AC093027.1-201ENST00000546698 429 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 VN1R91P-201ENST00000594377 169 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 MIR6504-201ENST00000613520 61 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 AL591926.4-201ENST00000616895 298 ntBASIC0.95□□□□□ -2.26
TRIM3O75382 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
TRIM3O75382 RNU4-79P-201ENST00000362764 141 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 Y_RNA.58-201ENST00000362807 102 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 Y_RNA.146-201ENST00000363549 102 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 Y_RNA.154-201ENST00000363624 102 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 Y_RNA.187-201ENST00000363918 113 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 Y_RNA.226-201ENST00000364337 114 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 RNY3P1-201ENST00000365085 102 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 RNY3-201ENST00000365484 102 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 Y_RNA.363-201ENST00000365529 113 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 RNU6-1054P-201ENST00000411293 104 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 AC245047.7-201ENST00000440265 293 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 SNORD19B-201ENST00000459623 84 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 CYCTP-201ENST00000504253 315 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 SNORA25.10-201ENST00000515926 124 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 AC092447.9-201ENST00000603395 144 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 AC022441.3-201ENST00000605737 136 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 AC004832.4-201ENST00000608952 331 ntBASIC0.94□□□□□ -2.26
TRIM3O75382 MIR4272-201ENST00000635924 64 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 245.2 ms