Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SEPT14P8-201ENST00000508026 178 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 RNU6-1338P-201ENST00000516328 91 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.35□□□□□ -2.19
HDAC3O15379 RPL21P9-201ENST00000556149 474 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 MIR5094-201ENST00000578766 85 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 AC005786.1-201ENST00000588553 154 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 AC012433.1-201ENST00000588916 398 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 U4.1-201ENST00000620349 87 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.35□□□□□ -2.19
HDAC3O15379 AC245060.5-201ENST00000610778 3293 ntBASIC1.34□□□□□ -2.19
HDAC3O15379 RNU4-90P-201ENST00000362773 141 ntBASIC1.34□□□□□ -2.19
HDAC3O15379 RNU6-324P-201ENST00000363957 106 ntBASIC1.34□□□□□ -2.19
HDAC3O15379 RNU4-13P-201ENST00000364019 141 ntBASIC1.34□□□□□ -2.19
HDAC3O15379 Y_RNA.518-201ENST00000384552 113 ntBASIC1.34□□□□□ -2.19
HDAC3O15379 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
HDAC3O15379 RPL23AP36-201ENST00000413895 458 ntBASIC1.34□□□□□ -2.19
HDAC3O15379 MTCO1P5-201ENST00000433573 344 ntBASIC1.34□□□□□ -2.19
HDAC3O15379 SNORD127-201ENST00000458892 86 ntBASIC1.34□□□□□ -2.19
HDAC3O15379 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.34□□□□□ -2.19
HDAC3O15379 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.34□□□□□ -2.19
HDAC3O15379 SNORA27.1-201ENST00000362604 124 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 RNU1-96P-201ENST00000364163 162 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 RNU6-702P-201ENST00000364982 107 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 Y_RNA.307-201ENST00000365022 117 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 Y_RNA.569-201ENST00000384749 103 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HDAC3O15379 SNORA17.3-201ENST00000391159 129 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 MIR1302-3-201ENST00000408128 138 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 RNU6-651P-201ENST00000411040 105 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 RNU2-61P-201ENST00000411069 191 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.33□□□□□ -2.2
HDAC3O15379 AL390729.2-201ENST00000416137 156 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 POLR2KP2-201ENST00000438155 177 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 AL606517.2-201ENST00000442855 241 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.33□□□□□ -2.2
HDAC3O15379 AC010409.1-201ENST00000487382 476 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 RNU6-63P-201ENST00000516690 95 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.33□□□□□ -2.2
HDAC3O15379 AC006380.1-201ENST00000603598 186 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 AP001485.1-201ENST00000604799 199 ntBASIC1.33□□□□□ -2.2
HDAC3O15379 AC068700.1-201ENST00000565862 3754 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.32□□□□□ -2.2
HDAC3O15379 AL391987.6-201ENST00000305671 199 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HDAC3O15379 RNA5SP432-201ENST00000362480 116 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNU6-1266P-201ENST00000362794 105 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNU6-407P-201ENST00000365280 104 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 Y_RNA.477-201ENST00000384352 108 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 SNORD116-13-201ENST00000384408 92 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNU6-482P-201ENST00000391068 107 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNU1-78P-201ENST00000391248 165 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNA5SP100-201ENST00000410903 110 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNA5SP59-201ENST00000410922 110 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 AC245517.4-201ENST00000448601 281 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNU6-1132P-201ENST00000459214 107 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 AC010598.1-201ENST00000510378 103 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 SERF1AP1-201ENST00000514575 187 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNU6-191P-201ENST00000516295 94 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNU2-31P-201ENST00000516954 155 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 RNA5SP437-201ENST00000517249 129 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 AC015720.1-201ENST00000565251 277 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 SUB1P4-201ENST00000566062 339 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 MIR4643-201ENST00000577473 78 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 MIR4438-201ENST00000585271 93 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 AC062037.2-201ENST00000610137 73 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 U6.73-201ENST00000619194 103 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.32□□□□□ -2.2
HDAC3O15379 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.32□□□□□ -2.2
HDAC3O15379 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HDAC3O15379 Y_RNA.14-201ENST00000362415 103 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RNU1-22P-201ENST00000363334 158 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 Y_RNA.136-201ENST00000363444 102 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RNU6-457P-201ENST00000363999 107 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RNU6-1048P-201ENST00000364054 107 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 Y_RNA.288-201ENST00000364854 92 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RNU6-117P-201ENST00000365415 107 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RNU6-203P-201ENST00000384038 104 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RNU6-296P-201ENST00000384608 107 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 Y_RNA.562-201ENST00000384695 113 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 MIR873-201ENST00000401120 77 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 MIR1253-201ENST00000408273 105 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RNU2-14P-201ENST00000411053 191 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 CST2P1-201ENST00000425770 87 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RPS26P55-201ENST00000471178 356 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RPS27P22-201ENST00000478056 241 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 AC091959.1-201ENST00000495857 238 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 AC097462.1-201ENST00000514125 324 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 RNA5SP20-201ENST00000515976 84 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.31□□□□□ -2.2
HDAC3O15379 AC069114.2-201ENST00000604699 304 ntBASIC1.31□□□□□ -2.2
HDAC3O15379 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
HDAC3O15379 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms