Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SNORD38C-201ENST00000384381 69 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 MTCYBP4-201ENST00000401524 249 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 SSR1P2-201ENST00000415208 787 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 RPL23AP75-201ENST00000491601 451 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 AC112204.1-201ENST00000502591 103 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 AC105029.1-201ENST00000520250 669 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 AP003181.2-201ENST00000528941 181 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 MIR4636-201ENST00000582271 80 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 MIR3941-201ENST00000582572 103 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 AC069431.2-201ENST00000604149 1099 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 AP001330.5-201ENST00000607176 411 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 AC084368.1-201ENST00000620935 65 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 MIR30D-201ENST00000362283 70 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 SNORD83B-201ENST00000386745 93 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-855P-201ENST00000410395 104 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU4-83P-201ENST00000410863 133 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 AL354751.2-201ENST00000415471 210 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 MTCO2P27-201ENST00000420740 428 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 SNRPGP10-201ENST00000432323 225 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 IGKV1-22-201ENST00000524313 326 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 AL121895.2-201ENST00000619558 447 ntBASIC-1.26□□□□□ -2.61
CHKB-CPT1BH3BT56 U8.6-201ENST00000364939 135 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-47P-201ENST00000383866 107 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-847P-201ENST00000411115 108 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 snoU13.2-201ENST00000459201 104 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 AC093303.1-201ENST00000514549 295 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 AP003168.1-201ENST00000530091 307 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 AL157687.1-201ENST00000554853 619 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 AP000811.1-201ENST00000603803 651 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 AC093726.3-201ENST00000637588 150 ntBASIC-1.27□□□□□ -2.61
CHKB-CPT1BH3BT56 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-726P-201ENST00000364680 107 ntBASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 AC090572.1-201ENST00000519251 160 ntBASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 AL359999.1-201ENST00000604513 294 ntBASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 AC005609.4-201ENST00000625071 447 ntBASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.28□□□□□ -2.61
CHKB-CPT1BH3BT56 Y_RNA.238-201ENST00000364441 102 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.355-201ENST00000365462 98 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.508-201ENST00000384502 114 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORD38B-201ENST00000384690 67 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORD73A-201ENST00000386062 65 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 AL008987.1-201ENST00000415528 237 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 AL512286.1-201ENST00000439244 400 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 U8.21-201ENST00000459536 136 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 AC008507.2-201ENST00000588402 1176 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 AL355297.3-201ENST00000604082 446 ntBASIC-1.29□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.796-201ENST00000364268 102 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.799-201ENST00000364992 102 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORA1.2-201ENST00000365189 134 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-784P-201ENST00000384330 106 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-291P-201ENST00000384720 107 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-131P-201ENST00000391144 107 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 MRPL42P2-201ENST00000403169 426 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-757P-201ENST00000410334 100 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 SCARNA18-201ENST00000459004 134 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 RPL7P42-201ENST00000481005 679 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 AC021146.6-201ENST00000514659 117 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU7-181P-201ENST00000517234 74 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 MIR4775-201ENST00000581168 75 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 AL158209.2-201ENST00000619266 216 ntBASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.3□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-324P-201ENST00000363957 106 ntBASIC-1.31□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORD93-201ENST00000408813 74 ntBASIC-1.31□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-765P-201ENST00000516916 99 ntBASIC-1.31□□□□□ -2.62
CHKB-CPT1BH3BT56 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.31□□□□□ -2.62
CHKB-CPT1BH3BT56 MIR6082-201ENST00000613604 109 ntBASIC-1.31□□□□□ -2.62
CHKB-CPT1BH3BT56 AL512427.1-201ENST00000618593 349 ntBASIC-1.31□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 MIR635-201ENST00000384830 98 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 AC073464.1-201ENST00000429823 534 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms