Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 U8.22-201ENST00000459141 133 ntBASIC0.25□□□□□ -2.37
RHBDD3Q9Y3P4 SNORA68.3-201ENST00000515906 83 ntBASIC0.25□□□□□ -2.37
RHBDD3Q9Y3P4 MTND2P38-201ENST00000522536 667 ntBASIC0.25□□□□□ -2.37
RHBDD3Q9Y3P4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.25□□□□□ -2.37
RHBDD3Q9Y3P4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.25□□□□□ -2.37
RHBDD3Q9Y3P4 MIR4300-201ENST00000581016 96 ntBASIC0.25□□□□□ -2.37
RHBDD3Q9Y3P4 AL162413.1-201ENST00000603198 110 ntBASIC0.25□□□□□ -2.37
RHBDD3Q9Y3P4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 SNORD114-23-201ENST00000363536 72 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 RNU6-1145P-201ENST00000384246 107 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 Y_RNA.498-201ENST00000384460 102 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 Y_RNA.533-201ENST00000384596 114 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 MTCO3P40-201ENST00000392516 676 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 RNA5SP475-201ENST00000410568 110 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 RNU6-1001P-201ENST00000411265 100 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 EIF1P2-201ENST00000428233 350 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 HMGN2P32-201ENST00000444648 269 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 ELOCP24-201ENST00000456370 334 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 AC022616.4-201ENST00000522985 181 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 AC010525.2-201ENST00000590920 195 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 AC007742.2-201ENST00000618226 398 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 AL359880.1-201ENST00000621879 266 ntBASIC0.24□□□□□ -2.37
RHBDD3Q9Y3P4 Y_RNA.212-201ENST00000364177 102 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 MIR516B2-201ENST00000385190 85 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 RNU6-613P-201ENST00000410412 108 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 AC005534.2-201ENST00000431047 433 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 RNU7-66P-201ENST00000459469 62 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 SNORA18.7-201ENST00000516910 131 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 AC018448.1-201ENST00000552843 316 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 AL512360.1-201ENST00000555346 234 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 AC125232.2-201ENST00000592457 143 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 AF250324.2-201ENST00000608299 610 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 AL591926.4-201ENST00000616895 298 ntBASIC0.23□□□□□ -2.37
RHBDD3Q9Y3P4 Y_RNA.77-201ENST00000362962 107 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 RNU6-1252P-201ENST00000363054 104 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 Y_RNA.106-201ENST00000363189 100 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 Y_RNA.243-201ENST00000364481 109 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 SNORD116-11-201ENST00000383882 92 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 RNU6-1310P-201ENST00000384153 107 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 AL354751.2-201ENST00000415471 210 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 MIR3672-201ENST00000584290 82 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 NBR2-204ENST00000587322 63 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 AL355073.2-201ENST00000612106 557 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 MIR3674-201ENST00000636576 68 ntBASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.22□□□□□ -2.37
RHBDD3Q9Y3P4 RNU6-222P-201ENST00000362438 107 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.621-201ENST00000411065 96 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-1304P-201ENST00000411374 106 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 AC105313.1-201ENST00000509121 353 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 MIR2115-201ENST00000516657 100 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.717-201ENST00000517106 92 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 AC015726.2-201ENST00000620112 122 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 AC091925.1-201ENST00000623204 462 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 AC124864.2-201ENST00000624736 186 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 AC010487.4-201ENST00000637027 61 ntBASIC0.21□□□□□ -2.38
RHBDD3Q9Y3P4 AL589743.1-201ENST00000551932 2712 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 MTND5P26-201ENST00000426018 1752 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.414-201ENST00000384011 101 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 SNORA2B-201ENST00000384583 137 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-136P-201ENST00000384663 107 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 MIR573-201ENST00000384964 99 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.615-201ENST00000410769 117 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 MTND2P9-201ENST00000422293 931 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 SNORD123-201ENST00000459473 70 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-1281P-201ENST00000516223 105 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.714-201ENST00000517065 90 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 RN7SL793P-201ENST00000583259 296 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 AC011712.1-201ENST00000588959 234 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 AC008133.2-201ENST00000624540 351 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 MIR4251-201ENST00000635819 61 ntBASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
RHBDD3Q9Y3P4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 snoU2-30.1-201ENST00000365012 70 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.361-201ENST00000365515 120 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.364-201ENST00000365532 101 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 RNY1P4-201ENST00000384595 115 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-625P-201ENST00000459412 107 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 AC116353.2-201ENST00000505332 712 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 AC010424.1-201ENST00000506336 297 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 AC119751.7-201ENST00000600494 245 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 AC090582.1-201ENST00000636321 199 ntBASIC0.19□□□□□ -2.38
RHBDD3Q9Y3P4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
RHBDD3Q9Y3P4 RNU6-1084P-201ENST00000362498 107 ntBASIC0.18□□□□□ -2.38
RHBDD3Q9Y3P4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.18□□□□□ -2.38
RHBDD3Q9Y3P4 MIR522-201ENST00000385071 87 ntBASIC0.18□□□□□ -2.38
RHBDD3Q9Y3P4 RNA5SP511-201ENST00000410487 115 ntBASIC0.18□□□□□ -2.38
RHBDD3Q9Y3P4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 270.5 ms