Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNU6-438P-201ENST00000365561 103 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 MIR548B-201ENST00000385247 97 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 SNORA48.1-201ENST00000390879 135 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 RPL23AP36-201ENST00000413895 458 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 CYCSP49-201ENST00000420810 319 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 NDUFB4P10-201ENST00000452541 359 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 AC091959.1-201ENST00000495857 238 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 RPS29P11-201ENST00000496507 171 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 ATP5EP1-201ENST00000510257 156 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 AC107393.1-201ENST00000512403 346 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 RNA5SP458-201ENST00000516188 119 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 RNU4-71P-201ENST00000516258 113 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 RPL21P9-201ENST00000556149 474 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.54-201ENST00000362766 105 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.65-201ENST00000362846 100 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.122-201ENST00000363331 96 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.217-201ENST00000364214 105 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 RNU6-1310P-201ENST00000384153 107 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.785-201ENST00000384290 109 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.515-201ENST00000384535 112 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 MIR586-201ENST00000385035 97 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 SNORA53-201ENST00000391141 249 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 AC009310.1-201ENST00000414414 451 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.641-201ENST00000459414 105 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 HMGN2P9-201ENST00000476875 229 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 SNORA27.4-201ENST00000516650 95 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 RNU1-117P-201ENST00000517041 158 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 AC022254.1-201ENST00000567857 235 ntBASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.82-201ENST00000363000 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.92-201ENST00000363043 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.117-201ENST00000363294 101 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 U3.8-201ENST00000363675 217 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 SNORD115-30-201ENST00000364117 82 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.235-201ENST00000364412 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.243-201ENST00000364481 109 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 SNORD31B-201ENST00000364977 69 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.306-201ENST00000365015 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.312-201ENST00000365089 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.322-201ENST00000365151 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 POLR2KP2-201ENST00000438155 177 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 SNORD2.1-201ENST00000458762 69 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.650-201ENST00000459002 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 RNU7-14P-201ENST00000459331 62 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 RNU6-436P-201ENST00000516171 114 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 RNU6-191P-201ENST00000516295 94 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.777-201ENST00000516982 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 MIR3145-201ENST00000580727 82 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 MIR4713-201ENST00000582691 75 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.771-201ENST00000598668 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 AC005828.6-201ENST00000606610 232 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 AC006001.4-201ENST00000622243 395 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.789-201ENST00000622480 102 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 AC084768.2-201ENST00000622736 221 ntBASIC1.93□□□□□ -2.1
DDX43Q9NXZ2 RNU4-80P-201ENST00000363200 141 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 SNORA72.2-201ENST00000365028 127 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 RNY4P28-201ENST00000365281 93 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 TOMM22P2-201ENST00000430735 237 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 AL135790.2-201ENST00000437701 267 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 SNORD116-28-201ENST00000516123 91 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 RNU6-155P-201ENST00000516347 100 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 AC005786.1-201ENST00000588553 154 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 DEFB117-201ENST00000602356 141 ntBASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
DDX43Q9NXZ2 SNORA25.1-201ENST00000362326 128 ntBASIC1.91□□□□□ -2.1
DDX43Q9NXZ2 RNU6-545P-201ENST00000362681 104 ntBASIC1.91□□□□□ -2.1
DDX43Q9NXZ2 RNA5SP475-201ENST00000410568 110 ntBASIC1.91□□□□□ -2.1
DDX43Q9NXZ2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.91□□□□□ -2.1
DDX43Q9NXZ2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.91□□□□□ -2.1
DDX43Q9NXZ2 RNVU1-2-201ENST00000516326 135 ntBASIC1.91□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.700-201ENST00000516806 100 ntBASIC1.91□□□□□ -2.1
DDX43Q9NXZ2 AL162424.1-201ENST00000602325 221 ntBASIC1.91□□□□□ -2.1
DDX43Q9NXZ2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.91□□□□□ -2.1
DDX43Q9NXZ2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 MIR340-201ENST00000362125 95 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 Y_RNA.200-201ENST00000364018 102 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 Y_RNA.329-201ENST00000365209 107 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 RNU6-662P-201ENST00000384253 104 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 RNU6-1289P-201ENST00000384431 106 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 MIR1283-1-201ENST00000408494 87 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 MIR1185-2-201ENST00000408687 86 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 MIR1298-201ENST00000408783 112 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 AC016925.1-201ENST00000458303 298 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 RNU6-107P-201ENST00000516643 102 ntBASIC1.9□□□□□ -2.11
DDX43Q9NXZ2 CBX3P4-201ENST00000538909 354 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms